RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 SLC39A7Q92504 469 aa9.76□□□□□ -0.85
SYN3-208ENST00000467095 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
SYN3-208ENST00000467095 SLIT3O75094 1523 aa9.76□□□□□ -0.85
SYN3-208ENST00000467095 LMO7Q8WWI1 1683 aa9.75□□□□□ -0.85
SYN3-208ENST00000467095 PEAK1Q9H792 1746 aa9.75□□□□□ -0.85
SYN3-208ENST00000467095 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
SYN3-208ENST00000467095 NFAT5O94916 1531 aa9.74□□□□□ -0.85
SYN3-208ENST00000467095 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
SYN3-208ENST00000467095 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
SYN3-208ENST00000467095 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.73□□□□□ -0.85
SYN3-208ENST00000467095 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 PSME1Q06323 249 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
SYN3-208ENST00000467095 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 NINLQ9Y2I6 1382 aa9.73□□□□□ -0.85
SYN3-208ENST00000467095 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
SYN3-208ENST00000467095 WNK3Q9BYP7 1800 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
SYN3-208ENST00000467095 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
SYN3-208ENST00000467095 COL14A1Q05707 1796 aaKnown RBP9.72□□□□□ -0.85
SYN3-208ENST00000467095 JCADQ9P266 1359 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
SYN3-208ENST00000467095 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
SYN3-208ENST00000467095 POLR3GLQ9BT43 218 aa9.71□□□□□ -0.86
SYN3-208ENST00000467095 NSD3Q9BZ95 1437 aa9.71□□□□□ -0.86
SYN3-208ENST00000467095 NUBP1P53384 320 aa9.7□□□□□ -0.86
SYN3-208ENST00000467095 NME9Q86XW9 330 aa9.7□□□□□ -0.86
SYN3-208ENST00000467095 PANK3Q9H999 370 aa9.7□□□□□ -0.86
SYN3-208ENST00000467095 USP19O94966 1318 aa9.7□□□□□ -0.86
SYN3-208ENST00000467095 BRD4O60885 1362 aaPredicted RBP9.7□□□□□ -0.86
SYN3-208ENST00000467095 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
SYN3-208ENST00000467095 FYB1O15117 783 aa9.69□□□□□ -0.86
SYN3-208ENST00000467095 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
SYN3-208ENST00000467095 VIRMAQ69YN4 1812 aaKnown RBP9.69□□□□□ -0.86
SYN3-208ENST00000467095 BRWD3Q6RI45 1802 aa9.69□□□□□ -0.86
SYN3-208ENST00000467095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.86
SYN3-208ENST00000467095 ZBTB47Q9UFB7 747 aaPredicted RBP9.69□□□□□ -0.86
SYN3-208ENST00000467095 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
SYN3-208ENST00000467095 FBLN1P23142 703 aa9.68□□□□□ -0.86
SYN3-208ENST00000467095 HDGFL2Q7Z4V5 671 aaPredicted RBP9.68□□□□□ -0.86
SYN3-208ENST00000467095 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
SYN3-208ENST00000467095 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
SYN3-208ENST00000467095 ARHGEF10O15013 1369 aa9.67□□□□□ -0.86
SYN3-208ENST00000467095 TIE1P35590 1138 aa9.67□□□□□ -0.86
SYN3-208ENST00000467095 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
SYN3-208ENST00000467095 SPATA31A6Q5VVP1 1343 aa9.66□□□□□ -0.86
SYN3-208ENST00000467095 POTEFA5A3E0 1075 aa9.66□□□□□ -0.86
SYN3-208ENST00000467095 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
SYN3-208ENST00000467095 GGNBP2Q9H3C7 697 aa9.66□□□□□ -0.86
SYN3-208ENST00000467095 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
SYN3-208ENST00000467095 SLIT2O94813 1529 aa9.66□□□□□ -0.86
SYN3-208ENST00000467095 FAM208AQ9UK61 1670 aaKnown RBP9.65□□□□□ -0.86
SYN3-208ENST00000467095 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
SYN3-208ENST00000467095 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
SYN3-208ENST00000467095 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
SYN3-208ENST00000467095 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
SYN3-208ENST00000467095 NLRP6P59044 892 aa9.65□□□□□ -0.86
SYN3-208ENST00000467095 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
SYN3-208ENST00000467095 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
SYN3-208ENST00000467095 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
SYN3-208ENST00000467095 GLI3P10071 1580 aa9.65□□□□□ -0.86
SYN3-208ENST00000467095 RGPD1P0DJD0 1748 aa9.65□□□□□ -0.87
SYN3-208ENST00000467095 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.87
SYN3-208ENST00000467095 BCL9LQ86UU0 1499 aa9.64□□□□□ -0.87
SYN3-208ENST00000467095 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
SYN3-208ENST00000467095 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
SYN3-208ENST00000467095 GCP02774 474 aa9.63□□□□□ -0.87
SYN3-208ENST00000467095 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
SYN3-208ENST00000467095 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
SYN3-208ENST00000467095 ADAMTS2O95450 1211 aa9.62□□□□□ -0.87
SYN3-208ENST00000467095 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
SYN3-208ENST00000467095 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
SYN3-208ENST00000467095 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
SYN3-208ENST00000467095 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
SYN3-208ENST00000467095 CPDO75976 1380 aa9.62□□□□□ -0.87
SYN3-208ENST00000467095 ABCC6O95255 1503 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 ARHGEF25Q86VW2 580 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 SBF2Q86WG5 1849 aa9.61□□□□□ -0.87
SYN3-208ENST00000467095 COL5A2P05997 1499 aaPredicted RBP9.6□□□□□ -0.87
SYN3-208ENST00000467095 SMG6Q86US8 1419 aaKnown RBP9.6□□□□□ -0.87
SYN3-208ENST00000467095 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
SYN3-208ENST00000467095 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
SYN3-208ENST00000467095 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
SYN3-208ENST00000467095 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
SYN3-208ENST00000467095 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
SYN3-208ENST00000467095 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
SYN3-208ENST00000467095 DLG5Q8TDM6 1919 aa9.59□□□□□ -0.87
SYN3-208ENST00000467095 POTEMA6NI47 508 aa9.59□□□□□ -0.87
SYN3-208ENST00000467095 SOX12O15370 315 aa9.59□□□□□ -0.87
SYN3-208ENST00000467095 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
SYN3-208ENST00000467095 TRIM35Q9UPQ4 493 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms