RNA–Protein interactions for RNA: ENST00000466996.5

LNP1-202, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5

Gene LNP1, Length 1,723 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-202ENST00000466996 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
LNP1-202ENST00000466996 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
LNP1-202ENST00000466996 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
LNP1-202ENST00000466996 RLBP1P12271 317 aa12.81□□□□□ -0.36
LNP1-202ENST00000466996 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
LNP1-202ENST00000466996 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
LNP1-202ENST00000466996 NHSL1Q5SYE7 1610 aa12.8□□□□□ -0.36
LNP1-202ENST00000466996 AAMPQ13685 434 aa12.8□□□□□ -0.36
LNP1-202ENST00000466996 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
LNP1-202ENST00000466996 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
LNP1-202ENST00000466996 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
LNP1-202ENST00000466996 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
LNP1-202ENST00000466996 PXDNQ92626 1479 aa12.79□□□□□ -0.36
LNP1-202ENST00000466996 HSPA1LP34931 641 aa12.79□□□□□ -0.36
LNP1-202ENST00000466996 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
LNP1-202ENST00000466996 KIF1AQ12756 1690 aa12.78□□□□□ -0.36
LNP1-202ENST00000466996 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
LNP1-202ENST00000466996 DDX17Q92841 729 aaKnown RBP12.78□□□□□ -0.36
LNP1-202ENST00000466996 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
LNP1-202ENST00000466996 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
LNP1-202ENST00000466996 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
LNP1-202ENST00000466996 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.36
LNP1-202ENST00000466996 FOXO3O43524 673 aa12.77□□□□□ -0.36
LNP1-202ENST00000466996 CABP1Q9NZU7 370 aa12.77□□□□□ -0.36
LNP1-202ENST00000466996 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.36
LNP1-202ENST00000466996 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
LNP1-202ENST00000466996 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
LNP1-202ENST00000466996 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
LNP1-202ENST00000466996 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
LNP1-202ENST00000466996 USP19O94966 1318 aa12.76□□□□□ -0.37
LNP1-202ENST00000466996 FYB1O15117 783 aa12.76□□□□□ -0.37
LNP1-202ENST00000466996 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
LNP1-202ENST00000466996 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
LNP1-202ENST00000466996 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
LNP1-202ENST00000466996 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
LNP1-202ENST00000466996 ACEP12821 1306 aa12.75□□□□□ -0.37
LNP1-202ENST00000466996 MVPQ14764 893 aaKnown RBP12.75□□□□□ -0.37
LNP1-202ENST00000466996 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
LNP1-202ENST00000466996 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
LNP1-202ENST00000466996 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
LNP1-202ENST00000466996 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
LNP1-202ENST00000466996 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
LNP1-202ENST00000466996 IL16Q14005 1332 aa12.74□□□□□ -0.37
LNP1-202ENST00000466996 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
LNP1-202ENST00000466996 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
LNP1-202ENST00000466996 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
LNP1-202ENST00000466996 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
LNP1-202ENST00000466996 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
LNP1-202ENST00000466996 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
LNP1-202ENST00000466996 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
LNP1-202ENST00000466996 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
LNP1-202ENST00000466996 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 TRPM3Q9HCF6 1732 aaPredicted RBP12.72□□□□□ -0.37
LNP1-202ENST00000466996 AKAP12Q02952 1782 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
LNP1-202ENST00000466996 SEC24BO95487 1268 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 FTSJ3Q8IY81 847 aaKnown RBP12.72□□□□□ -0.37
LNP1-202ENST00000466996 LRRC59Q96AG4 307 aaKnown RBP12.72□□□□□ -0.37
LNP1-202ENST00000466996 USP6P35125 1406 aa12.72□□□□□ -0.37
LNP1-202ENST00000466996 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
LNP1-202ENST00000466996 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.38
LNP1-202ENST00000466996 JCADQ9P266 1359 aa12.7□□□□□ -0.38
LNP1-202ENST00000466996 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
LNP1-202ENST00000466996 PSME1Q06323 249 aa12.7□□□□□ -0.38
LNP1-202ENST00000466996 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
LNP1-202ENST00000466996 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
LNP1-202ENST00000466996 TRIM27P14373 513 aa12.69□□□□□ -0.38
LNP1-202ENST00000466996 RIPK4P57078 832 aa12.69□□□□□ -0.38
LNP1-202ENST00000466996 TNS3Q68CZ2 1445 aa12.69□□□□□ -0.38
LNP1-202ENST00000466996 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
LNP1-202ENST00000466996 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
LNP1-202ENST00000466996 COL22A1Q8NFW1 1626 aaPredicted RBP12.68□□□□□ -0.38
LNP1-202ENST00000466996 CDK12Q9NYV4 1490 aaPredicted RBP12.68□□□□□ -0.38
LNP1-202ENST00000466996 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
LNP1-202ENST00000466996 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
LNP1-202ENST00000466996 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
LNP1-202ENST00000466996 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
LNP1-202ENST00000466996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.385e-7■■■□□ 18
LNP1-202ENST00000466996 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
LNP1-202ENST00000466996 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
LNP1-202ENST00000466996 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
LNP1-202ENST00000466996 HDAC1Q13547 482 aaPredicted RBP12.66□□□□□ -0.38
LNP1-202ENST00000466996 BECN1Q14457 450 aa12.66□□□□□ -0.38
LNP1-202ENST00000466996 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
LNP1-202ENST00000466996 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
LNP1-202ENST00000466996 FCHSD2O94868 740 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 TBC1D32Q96NH3 1257 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 SPATA31A6Q5VVP1 1343 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 MED1Q15648 1581 aaPredicted RBP12.65□□□□□ -0.38
LNP1-202ENST00000466996 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
LNP1-202ENST00000466996 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.38
LNP1-202ENST00000466996 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.39
LNP1-202ENST00000466996 USP31Q70CQ4 1352 aa12.65□□□□□ -0.39
LNP1-202ENST00000466996 FRAT2O75474 233 aaPredicted RBP12.63□□□□□ -0.39
LNP1-202ENST00000466996 GSE1Q14687 1217 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms