RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 FCHSD2O94868 740 aa10.9□□□□□ -0.66
ACTB-208ENST00000464611 POTEIP0CG38 1075 aa10.9□□□□□ -0.66
ACTB-208ENST00000464611 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
ACTB-208ENST00000464611 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
ACTB-208ENST00000464611 MSH6P52701 1360 aa10.9□□□□□ -0.67
ACTB-208ENST00000464611 TMEM94Q12767 1356 aa10.9□□□□□ -0.67
ACTB-208ENST00000464611 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
ACTB-208ENST00000464611 BCAR3O75815 825 aa10.89□□□□□ -0.67
ACTB-208ENST00000464611 PRAM1Q96QH2 718 aa10.89□□□□□ -0.67
ACTB-208ENST00000464611 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
ACTB-208ENST00000464611 FYB1O15117 783 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 DIAPH1O60610 1272 aaKnown RBP10.88□□□□□ -0.67
ACTB-208ENST00000464611 ITSN1Q15811 1721 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
ACTB-208ENST00000464611 CDK19Q9BWU1 502 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 FMN2Q9NZ56 1722 aa10.88□□□□□ -0.67
ACTB-208ENST00000464611 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
ACTB-208ENST00000464611 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
ACTB-208ENST00000464611 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
ACTB-208ENST00000464611 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
ACTB-208ENST00000464611 ALDH1L2Q3SY69 923 aa10.87□□□□□ -0.67
ACTB-208ENST00000464611 PLEKHF1Q96S99 279 aa10.87□□□□□ -0.67
ACTB-208ENST00000464611 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
ACTB-208ENST00000464611 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
ACTB-208ENST00000464611 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
ACTB-208ENST00000464611 LMOD3Q0VAK6 560 aa10.85□□□□□ -0.67
ACTB-208ENST00000464611 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
ACTB-208ENST00000464611 NPM2Q86SE8 214 aaKnown RBP10.85□□□□□ -0.67
ACTB-208ENST00000464611 UPF2Q9HAU5 1272 aaKnown RBP10.85□□□□□ -0.67
ACTB-208ENST00000464611 DDX19BQ9UMR2 479 aa10.85□□□□□ -0.67
ACTB-208ENST00000464611 AATKQ6ZMQ8 1374 aa10.85□□□□□ -0.67
ACTB-208ENST00000464611 COL3A1P02461 1466 aaPredicted RBP10.85□□□□□ -0.67
ACTB-208ENST00000464611 KIF16BQ96L93 1317 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 BECN1Q14457 450 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
ACTB-208ENST00000464611 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
ACTB-208ENST00000464611 FRAT1Q92837 279 aaPredicted RBP10.84□□□□□ -0.67
ACTB-208ENST00000464611 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 KIF1AQ12756 1690 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 TOPAZ1Q8N9V7 1692 aa10.84□□□□□ -0.67
ACTB-208ENST00000464611 EDC4Q6P2E9 1401 aaKnown RBP10.84□□□□□ -0.67
ACTB-208ENST00000464611 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
ACTB-208ENST00000464611 SAFB2Q14151 953 aaKnown RBP eCLIP10.83□□□□□ -0.68
ACTB-208ENST00000464611 CADPS2Q86UW7 1296 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 FTSJ3Q8IY81 847 aaKnown RBP10.83□□□□□ -0.68
ACTB-208ENST00000464611 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
ACTB-208ENST00000464611 WASLO00401 505 aaPredicted RBP10.82□□□□□ -0.68
ACTB-208ENST00000464611 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
ACTB-208ENST00000464611 ATF3P18847 181 aa10.82□□□□□ -0.68
ACTB-208ENST00000464611 RIPK4P57078 832 aa10.82□□□□□ -0.68
ACTB-208ENST00000464611 HDAC1Q13547 482 aaPredicted RBP10.82□□□□□ -0.68
ACTB-208ENST00000464611 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
ACTB-208ENST00000464611 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
ACTB-208ENST00000464611 CABP1Q9NZU7 370 aa10.82□□□□□ -0.68
ACTB-208ENST00000464611 IGHDP01880 384 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 ATF7IPQ6VMQ6 1270 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
ACTB-208ENST00000464611 CCDC61Q9Y6R9 512 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 MST1RQ04912 1400 aa10.81□□□□□ -0.68
ACTB-208ENST00000464611 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
ACTB-208ENST00000464611 DEKP35659 375 aaKnown RBP10.8□□□□□ -0.68
ACTB-208ENST00000464611 GNAI1P63096 354 aa10.8□□□□□ -0.68
ACTB-208ENST00000464611 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
ACTB-208ENST00000464611 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
ACTB-208ENST00000464611 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
ACTB-208ENST00000464611 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
ACTB-208ENST00000464611 RGS3P49796 1198 aa10.79□□□□□ -0.68
ACTB-208ENST00000464611 SMC4Q9NTJ3 1288 aa10.79□□□□□ -0.68
ACTB-208ENST00000464611 TOM1O60784 492 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
ACTB-208ENST00000464611 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 COG3Q96JB2 828 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 POLKQ9UBT6 870 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
ACTB-208ENST00000464611 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
ACTB-208ENST00000464611 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.68
ACTB-208ENST00000464611 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
ACTB-208ENST00000464611 NBR1Q14596 966 aa10.77□□□□□ -0.69
ACTB-208ENST00000464611 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
ACTB-208ENST00000464611 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
ACTB-208ENST00000464611 RGPD8O14715 1765 aaPredicted RBP10.76□□□□□ -0.69
ACTB-208ENST00000464611 SMC5Q8IY18 1101 aa10.76□□□□□ -0.69
ACTB-208ENST00000464611 NUDT16Q96DE0 195 aaKnown RBP10.76□□□□□ -0.69
ACTB-208ENST00000464611 PCDHB15Q9Y5E8 787 aa10.76□□□□□ -0.69
ACTB-208ENST00000464611 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
ACTB-208ENST00000464611 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
ACTB-208ENST00000464611 PDZRN3Q9UPQ7 1066 aa10.75□□□□□ -0.69
ACTB-208ENST00000464611 AHDC1Q5TGY3 1603 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms