RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
MSH5-211ENST00000463144 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
MSH5-211ENST00000463144 SOX12O15370 315 aa13.13□□□□□ -0.31
MSH5-211ENST00000463144 NEFMP07197 916 aa13.13□□□□□ -0.31
MSH5-211ENST00000463144 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
MSH5-211ENST00000463144 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
MSH5-211ENST00000463144 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
MSH5-211ENST00000463144 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
MSH5-211ENST00000463144 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
MSH5-211ENST00000463144 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
MSH5-211ENST00000463144 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
MSH5-211ENST00000463144 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
MSH5-211ENST00000463144 IGHDP01880 384 aa13.1□□□□□ -0.31
MSH5-211ENST00000463144 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
MSH5-211ENST00000463144 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 MSH5O43196 834 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 MS4A1P11836 297 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 NLRP6P59044 892 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
MSH5-211ENST00000463144 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
MSH5-211ENST00000463144 FLT4P35916 1363 aa13.08□□□□□ -0.32
MSH5-211ENST00000463144 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
MSH5-211ENST00000463144 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
MSH5-211ENST00000463144 TRIM27P14373 513 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 PDE4AP27815 886 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 GNAI1P63096 354 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
MSH5-211ENST00000463144 ABTB2Q8N961 1025 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 MBIPQ9NS73 344 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
MSH5-211ENST00000463144 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
MSH5-211ENST00000463144 TSPYL6Q8N831 410 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
MSH5-211ENST00000463144 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
MSH5-211ENST00000463144 VAMP4O75379 141 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 AMPHP49418 695 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
MSH5-211ENST00000463144 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 BACH2Q9BYV9 841 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
MSH5-211ENST00000463144 AAMPQ13685 434 aa13.04□□□□□ -0.32
MSH5-211ENST00000463144 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
MSH5-211ENST00000463144 AEBP2Q6ZN18 517 aaPredicted RBP13.04□□□□□ -0.32
MSH5-211ENST00000463144 EYA1Q99502 592 aa13.04□□□□□ -0.32
MSH5-211ENST00000463144 KDRP35968 1356 aa13.03□□□□□ -0.32
MSH5-211ENST00000463144 HOXC9P31274 260 aa13.03□□□□□ -0.32
MSH5-211ENST00000463144 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
MSH5-211ENST00000463144 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
MSH5-211ENST00000463144 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.32
MSH5-211ENST00000463144 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.32
MSH5-211ENST00000463144 ZNF428Q96B54 188 aa13.02□□□□□ -0.32
MSH5-211ENST00000463144 ORAI2Q96SN7 254 aa13.02□□□□□ -0.32
MSH5-211ENST00000463144 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.33
MSH5-211ENST00000463144 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
MSH5-211ENST00000463144 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
MSH5-211ENST00000463144 MCM10Q7L590 875 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 LTN1O94822 1766 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 FOXO3O43524 673 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 PSME1Q06323 249 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
MSH5-211ENST00000463144 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
MSH5-211ENST00000463144 KIF16BQ96L93 1317 aa13.01□□□□□ -0.33
MSH5-211ENST00000463144 NFAT5O94916 1531 aa13□□□□□ -0.33
MSH5-211ENST00000463144 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
MSH5-211ENST00000463144 CHL1O00533 1208 aa13□□□□□ -0.33
MSH5-211ENST00000463144 CRB1P82279 1406 aa12.99□□□□□ -0.33
MSH5-211ENST00000463144 IPO8O15397 1037 aaKnown RBP12.99□□□□□ -0.33
MSH5-211ENST00000463144 RGS3P49796 1198 aa12.99□□□□□ -0.33
MSH5-211ENST00000463144 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
MSH5-211ENST00000463144 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
MSH5-211ENST00000463144 STRCP1A6NGW2 1772 aa12.98□□□□□ -0.33
MSH5-211ENST00000463144 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
MSH5-211ENST00000463144 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
MSH5-211ENST00000463144 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
MSH5-211ENST00000463144 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
MSH5-211ENST00000463144 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
MSH5-211ENST00000463144 IP6K1Q92551 441 aa12.96□□□□□ -0.33
MSH5-211ENST00000463144 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
MSH5-211ENST00000463144 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
MSH5-211ENST00000463144 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.33
MSH5-211ENST00000463144 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
MSH5-211ENST00000463144 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.34
MSH5-211ENST00000463144 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.34
MSH5-211ENST00000463144 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
MSH5-211ENST00000463144 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
MSH5-211ENST00000463144 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms