RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 SLC19A1P41440 591 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 TRIM67Q6ZTA4 783 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-206ENST00000461574 FCHSD2O94868 740 aa8.13□□□□□ -1.11
BRCA1-206ENST00000461574 NLRP1Q9C000 1473 aa8.13□□□□□ -1.11
BRCA1-206ENST00000461574 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-206ENST00000461574 WASHC2CQ9Y4E1 1318 aa8.12□□□□□ -1.11
BRCA1-206ENST00000461574 KIF3BO15066 747 aa8.12□□□□□ -1.11
BRCA1-206ENST00000461574 S1PR4O95977 384 aa8.12□□□□□ -1.11
BRCA1-206ENST00000461574 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-206ENST00000461574 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-206ENST00000461574 EHBP1L1Q8N3D4 1523 aa8.12□□□□□ -1.11
BRCA1-206ENST00000461574 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
BRCA1-206ENST00000461574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.11□□□□□ -1.11
BRCA1-206ENST00000461574 CCDC141Q6ZP82 1450 aa8.11□□□□□ -1.11
BRCA1-206ENST00000461574 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
BRCA1-206ENST00000461574 RTEL1-TNFRSF6BF6WH68 1400 aa8.11□□□□□ -1.11
BRCA1-206ENST00000461574 DHX29Q7Z478 1369 aaKnown RBP8.1□□□□□ -1.11
BRCA1-206ENST00000461574 ZNF644Q9H582 1327 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-206ENST00000461574 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 ANKLE1Q8NAG6 615 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 MED14O60244 1454 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 ALKQ9UM73 1620 aa8.1□□□□□ -1.11
BRCA1-206ENST00000461574 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
BRCA1-206ENST00000461574 MIA2Q96PC5 1412 aa8.09□□□□□ -1.11
BRCA1-206ENST00000461574 CFAP65Q6ZU64 1925 aaKnown RBP8.09□□□□□ -1.11
BRCA1-206ENST00000461574 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
BRCA1-206ENST00000461574 CAMSAP2Q08AD1 1489 aa8.08□□□□□ -1.12
BRCA1-206ENST00000461574 MBD5Q9P267 1494 aa8.08□□□□□ -1.12
BRCA1-206ENST00000461574 ADH1BP00325 375 aa8.08□□□□□ -1.12
BRCA1-206ENST00000461574 ZNF598Q86UK7 904 aaKnown RBP8.08□□□□□ -1.12
BRCA1-206ENST00000461574 CEP152O94986 1710 aa8.08□□□□□ -1.12
BRCA1-206ENST00000461574 UBR1Q8IWV7 1749 aa8.07□□□□□ -1.12
BRCA1-206ENST00000461574 NR1I2O75469 434 aa8.07□□□□□ -1.12
BRCA1-206ENST00000461574 OATP04181 439 aa8.07□□□□□ -1.12
BRCA1-206ENST00000461574 XIRP1Q702N8 1843 aaKnown RBP8.06□□□□□ -1.12
BRCA1-206ENST00000461574 HIC1Q14526 733 aa8.06□□□□□ -1.12
BRCA1-206ENST00000461574 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
BRCA1-206ENST00000461574 RBM26Q5T8P6 1007 aaKnown RBP8.06□□□□□ -1.12
BRCA1-206ENST00000461574 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
BRCA1-206ENST00000461574 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
BRCA1-206ENST00000461574 SCUBE3Q8IX30 993 aa8.06□□□□□ -1.12
BRCA1-206ENST00000461574 SCAF11Q99590 1463 aaKnown RBP8.06□□□□□ -1.12
BRCA1-206ENST00000461574 CEP162Q5TB80 1403 aa8.05□□□□□ -1.12
BRCA1-206ENST00000461574 EIF2AK4Q9P2K8 1649 aaKnown RBP8.05□□□□□ -1.12
BRCA1-206ENST00000461574 FECHP22830 423 aa8.05□□□□□ -1.12
BRCA1-206ENST00000461574 PLA2G2CQ5R387 149 aa8.05□□□□□ -1.12
BRCA1-206ENST00000461574 SLC6A16Q9GZN6 736 aa8.05□□□□□ -1.12
BRCA1-206ENST00000461574 SETD1AO15047 1707 aaKnown RBP8.05□□□□□ -1.12
BRCA1-206ENST00000461574 ARHGEF5Q12774 1597 aa8.05□□□□□ -1.12
BRCA1-206ENST00000461574 ABCC3O15438 1527 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-206ENST00000461574 TSPY4P0CV99 314 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 TSPY10P0CW01 314 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 PRR20EP86478 221 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 PRR20CP86479 221 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 PRR20DP86480 221 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 PRR20BP86481 221 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 PRR20AP86496 221 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 MYT1Q01538 1121 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 ERVK-7P63135 1459 aa8.04□□□□□ -1.12
BRCA1-206ENST00000461574 ROBO1Q9Y6N7 1651 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 NCOA2Q15596 1464 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 GDF9O60383 454 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 PKDCCQ504Y2 493 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
BRCA1-206ENST00000461574 DGAT1O75907 488 aa8.02□□□□□ -1.13
BRCA1-206ENST00000461574 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-206ENST00000461574 SPSB2Q99619 263 aa8.02□□□□□ -1.13
BRCA1-206ENST00000461574 EID1Q9Y6B2 187 aa8.02□□□□□ -1.13
BRCA1-206ENST00000461574 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
BRCA1-206ENST00000461574 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
BRCA1-206ENST00000461574 GNPATO15228 680 aa8.01□□□□□ -1.13
BRCA1-206ENST00000461574 GPR37O15354 613 aa8.01□□□□□ -1.13
BRCA1-206ENST00000461574 NLRP7Q8WX94 980 aa8.01□□□□□ -1.13
BRCA1-206ENST00000461574 RGS17Q9UGC6 210 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-206ENST00000461574 PHLPP1O60346 1717 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 MROH1Q8NDA8 1641 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 SLIT1O75093 1534 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 FAM187AA6NFU0 413 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 TXNDC2Q86VQ3 553 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 RDH13Q8NBN7 331 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 DAXXQ9UER7 740 aaPredicted RBP8□□□□□ -1.13
BRCA1-206ENST00000461574 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
BRCA1-206ENST00000461574 POTECB2RU33 542 aa7.99□□□□□ -1.13
BRCA1-206ENST00000461574 MORN1Q5T089 497 aa7.99□□□□□ -1.13
BRCA1-206ENST00000461574 DUOX2Q9NRD8 1548 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 FAM135BQ49AJ0 1406 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 FUT2Q10981 343 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 POTEAQ6S8J7 498 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 ARHGAP23Q9P227 1491 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms