RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 HSP90B1P14625 803 aaKnown RBP14.66□□□□□ -0.06
CPNE6-202ENST00000460657 NUCB1Q02818 461 aa14.66□□□□□ -0.06
CPNE6-202ENST00000460657 PTPRTO14522 1441 aa14.66□□□□□ -0.06
CPNE6-202ENST00000460657 LRRCC1Q9C099 1032 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 SURF6O75683 361 aaKnown RBP14.65□□□□□ -0.06
CPNE6-202ENST00000460657 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 PSME1Q06323 249 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 NEXNQ0ZGT2 675 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 TTC37Q6PGP7 1564 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 MBD3O95983 291 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
CPNE6-202ENST00000460657 SEC24BO95487 1268 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
CPNE6-202ENST00000460657 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
CPNE6-202ENST00000460657 TRMT2AQ8IZ69 625 aaKnown RBP14.64□□□□□ -0.07
CPNE6-202ENST00000460657 SMC3Q9UQE7 1217 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 A0A1W2PP64 1363 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 MCM10Q7L590 875 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 ABTB2Q8N961 1025 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
CPNE6-202ENST00000460657 SYNMO15061 1565 aa14.63□□□□□ -0.07
CPNE6-202ENST00000460657 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
CPNE6-202ENST00000460657 KDM5AP29375 1690 aaKnown RBP14.63□□□□□ -0.07
CPNE6-202ENST00000460657 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
CPNE6-202ENST00000460657 CCDC173Q0VFZ6 552 aa14.63□□□□□ -0.07
CPNE6-202ENST00000460657 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
CPNE6-202ENST00000460657 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
CPNE6-202ENST00000460657 CNTROBQ8N137 903 aa14.63□□□□□ -0.07
CPNE6-202ENST00000460657 TRPM2O94759 1503 aa14.62□□□□□ -0.07
CPNE6-202ENST00000460657 SMC5Q8IY18 1101 aa14.62□□□□□ -0.07
CPNE6-202ENST00000460657 KIF3AQ9Y496 699 aa14.62□□□□□ -0.07
CPNE6-202ENST00000460657 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
CPNE6-202ENST00000460657 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
CPNE6-202ENST00000460657 GORABQ5T7V8 394 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.61□□□□□ -0.07
CPNE6-202ENST00000460657 CLASRPQ8N2M8 674 aaKnown RBP14.61□□□□□ -0.07
CPNE6-202ENST00000460657 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 FBLN1P23142 703 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 RNF20Q5VTR2 975 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 SLC26A8Q96RN1 970 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
CPNE6-202ENST00000460657 TNPO1Q92973 898 aaKnown RBP14.6□□□□□ -0.07
CPNE6-202ENST00000460657 POLKQ9UBT6 870 aa14.6□□□□□ -0.07
CPNE6-202ENST00000460657 TRPM1Q7Z4N2 1603 aa14.6□□□□□ -0.07
CPNE6-202ENST00000460657 ABCC1P33527 1531 aa14.6□□□□□ -0.07
CPNE6-202ENST00000460657 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.6□□□□□ -0.07
CPNE6-202ENST00000460657 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
CPNE6-202ENST00000460657 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
CPNE6-202ENST00000460657 PTPRCP08575 1304 aa14.59□□□□□ -0.07
CPNE6-202ENST00000460657 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
CPNE6-202ENST00000460657 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
CPNE6-202ENST00000460657 ZNF330Q9Y3S2 320 aaPredicted RBP14.59□□□□□ -0.07
CPNE6-202ENST00000460657 IQGAP3Q86VI3 1631 aa14.58□□□□□ -0.07
CPNE6-202ENST00000460657 H3BQV1 296 aa14.58□□□□□ -0.07
CPNE6-202ENST00000460657 IFFO2Q5TF58 517 aa14.58□□□□□ -0.07
CPNE6-202ENST00000460657 PLXNC1O60486 1568 aa14.58□□□□□ -0.08
CPNE6-202ENST00000460657 UHRF1BP1LA0JNW5 1464 aa14.58□□□□□ -0.08
CPNE6-202ENST00000460657 FAM83GA6ND36 823 aa14.58□□□□□ -0.08
CPNE6-202ENST00000460657 SMARCA5O60264 1052 aaPredicted RBP14.58□□□□□ -0.08
CPNE6-202ENST00000460657 EXOC6BQ9Y2D4 811 aa14.58□□□□□ -0.08
CPNE6-202ENST00000460657 VPS37CA5D8V6 355 aaPredicted RBP14.58□□□□□ -0.08
CPNE6-202ENST00000460657 GNL2Q13823 731 aaKnown RBP14.58□□□□□ -0.08
CPNE6-202ENST00000460657 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 FAM184AQ8NB25 1140 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 ESPNB1AK53 854 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 THEMISQ8N1K5 641 aaPredicted RBP14.57□□□□□ -0.08
CPNE6-202ENST00000460657 MYOM2P54296 1465 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 VAMP4O75379 141 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
CPNE6-202ENST00000460657 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
CPNE6-202ENST00000460657 TAF7LQ5H9L4 462 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 SNX21Q969T3 373 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 UNC13BO14795 1591 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 CCDC39Q9UFE4 941 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
CPNE6-202ENST00000460657 TTC21BQ7Z4L5 1316 aa14.55□□□□□ -0.08
CPNE6-202ENST00000460657 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
CPNE6-202ENST00000460657 SSFA2P28290 1259 aa14.55□□□□□ -0.08
CPNE6-202ENST00000460657 TTC22Q5TAA0 569 aa14.55□□□□□ -0.08
CPNE6-202ENST00000460657 MX1P20591 662 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 ERC1Q8IUD2 1116 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 C8orf58Q8NAV2 365 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
CPNE6-202ENST00000460657 NPATQ14207 1427 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 F6X3S4 739 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
CPNE6-202ENST00000460657 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 ARID3AQ99856 593 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 PHACTR3Q96KR7 559 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 TSPY26PQ9H489 355 aa14.54□□□□□ -0.08
CPNE6-202ENST00000460657 SRGAP3O43295 1099 aa14.53□□□□□ -0.08
CPNE6-202ENST00000460657 PSMA5P28066 241 aa14.53□□□□□ -0.08
CPNE6-202ENST00000460657 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms