RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 NSD2O96028 1365 aa11.47□□□□□ -0.57
MCF2L2-204ENST00000459750 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 PUS7Q96PZ0 661 aaKnown RBP11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 THEMISQ8N1K5 641 aaPredicted RBP11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 DDX17Q92841 729 aaKnown RBP11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
MCF2L2-204ENST00000459750 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
MCF2L2-204ENST00000459750 FGD1P98174 961 aa11.46□□□□□ -0.58
MCF2L2-204ENST00000459750 ZMYND15Q9H091 742 aa11.46□□□□□ -0.58
MCF2L2-204ENST00000459750 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.58
MCF2L2-204ENST00000459750 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
MCF2L2-204ENST00000459750 MS4A1P11836 297 aa11.45□□□□□ -0.58
MCF2L2-204ENST00000459750 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
MCF2L2-204ENST00000459750 CCDC27Q2M243 656 aa11.45□□□□□ -0.58
MCF2L2-204ENST00000459750 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 MFAP1P55081 439 aaKnown RBP11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 RTL5Q5HYW3 569 aaPredicted RBP11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 ADAMTS13Q76LX8 1427 aa11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 F6X3S4 739 aa11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 VAMP4O75379 141 aa11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
MCF2L2-204ENST00000459750 ANKRD45Q5TZF3 282 aa11.43□□□□□ -0.58
MCF2L2-204ENST00000459750 ARXQ96QS3 562 aa11.43□□□□□ -0.58
MCF2L2-204ENST00000459750 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
MCF2L2-204ENST00000459750 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
MCF2L2-204ENST00000459750 SPATA31D1Q6ZQQ2 1576 aa11.43□□□□□ -0.58
MCF2L2-204ENST00000459750 NGEFQ8N5V2 710 aa11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 EDC4Q6P2E9 1401 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-204ENST00000459750 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 PSME1Q06323 249 aa11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 AEBP2Q6ZN18 517 aaPredicted RBP11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 EYA1Q99502 592 aa11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 AGLP35573 1532 aa11.41□□□□□ -0.58
MCF2L2-204ENST00000459750 GNAI1P63096 354 aa11.4□□□□□ -0.58
MCF2L2-204ENST00000459750 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
MCF2L2-204ENST00000459750 CPSF1Q10570 1443 aaKnown RBP11.4□□□□□ -0.58
MCF2L2-204ENST00000459750 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.59
MCF2L2-204ENST00000459750 TSPYL4Q9UJ04 414 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 ATP7BP35670 1465 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 ANXA1P04083 346 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 G2E3Q7L622 706 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 HSPA2P54652 639 aa11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
MCF2L2-204ENST00000459750 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 SMARCA5O60264 1052 aaPredicted RBP11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
MCF2L2-204ENST00000459750 ANKLE2Q86XL3 938 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 ZBTB40Q9NUA8 1239 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 AAMPQ13685 434 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 CABLES1Q8TDN4 633 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
MCF2L2-204ENST00000459750 PLEKHG1Q9ULL1 1385 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 TSHZ3Q63HK5 1081 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
MCF2L2-204ENST00000459750 USP6P35125 1406 aa11.35□□□□□ -0.59
MCF2L2-204ENST00000459750 OTUD7AQ8TE49 926 aaPredicted RBP11.35□□□□□ -0.59
MCF2L2-204ENST00000459750 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
MCF2L2-204ENST00000459750 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 MEIS3Q99687 375 aa11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 RBM10P98175 930 aaKnown RBP11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 FRAT2O75474 233 aaPredicted RBP11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 USP19O94966 1318 aa11.34□□□□□ -0.59
MCF2L2-204ENST00000459750 KCNQ3O43525 872 aa11.33□□□□□ -0.6
MCF2L2-204ENST00000459750 HOXC9P31274 260 aa11.33□□□□□ -0.6
MCF2L2-204ENST00000459750 UPF2Q9HAU5 1272 aaKnown RBP11.33□□□□□ -0.6
MCF2L2-204ENST00000459750 LGR6Q9HBX8 967 aa11.33□□□□□ -0.6
MCF2L2-204ENST00000459750 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms