RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 SMC4Q9NTJ3 1288 aa27.67■■■□□ 2.02
SH3D21-201ENST00000453908 MSH5O43196 834 aa27.67■■■□□ 2.02
SH3D21-201ENST00000453908 TTC21AQ8NDW8 1320 aa27.66■■■□□ 2.02
SH3D21-201ENST00000453908 SULT6B1Q6IMI4 303 aa27.66■■■□□ 2.02
SH3D21-201ENST00000453908 USP31Q70CQ4 1352 aa27.65■■■□□ 2.02
SH3D21-201ENST00000453908 PEAK1Q9H792 1746 aa27.65■■■□□ 2.02
SH3D21-201ENST00000453908 SSH1Q8WYL5 1049 aa27.65■■■□□ 2.02
SH3D21-201ENST00000453908 SETD1BQ9UPS6 1966 aaKnown RBP27.64■■■□□ 2.02
SH3D21-201ENST00000453908 MAP3K19Q56UN5 1328 aa27.64■■■□□ 2.02
SH3D21-201ENST00000453908 FAM83GA6ND36 823 aa27.63■■■□□ 2.01
SH3D21-201ENST00000453908 NALCNQ8IZF0 1738 aa27.63■■■□□ 2.01
SH3D21-201ENST00000453908 CT47B1P0C2W7 299 aaPredicted RBP27.63■■■□□ 2.01
SH3D21-201ENST00000453908 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
SH3D21-201ENST00000453908 PAK3O75914 559 aaPredicted RBP27.62■■■□□ 2.01
SH3D21-201ENST00000453908 IGHDP01880 384 aa27.62■■■□□ 2.01
SH3D21-201ENST00000453908 NLRP6P59044 892 aa27.62■■■□□ 2.01
SH3D21-201ENST00000453908 ANKARQ7Z5J8 1434 aa27.62■■■□□ 2.01
SH3D21-201ENST00000453908 DCTN1Q14203 1278 aa27.61■■■□□ 2.01
SH3D21-201ENST00000453908 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
SH3D21-201ENST00000453908 ZKSCAN2Q63HK3 967 aa27.6■■■□□ 2.01
SH3D21-201ENST00000453908 PIK3C2AO00443 1686 aa27.59■■■□□ 2.01
SH3D21-201ENST00000453908 PDE4AP27815 886 aa27.59■■■□□ 2.01
SH3D21-201ENST00000453908 FTSJ3Q8IY81 847 aaKnown RBP27.59■■■□□ 2.01
SH3D21-201ENST00000453908 C14orf37Q86TY3 774 aa27.58■■■□□ 2.01
SH3D21-201ENST00000453908 DLG5Q8TDM6 1919 aa27.57■■■□□ 2
SH3D21-201ENST00000453908 MS4A1P11836 297 aa27.57■■■□□ 2
SH3D21-201ENST00000453908 NPHP4O75161 1426 aaPredicted RBP27.56■■■□□ 2
SH3D21-201ENST00000453908 TRIM27P14373 513 aa27.56■■■□□ 2
SH3D21-201ENST00000453908 ABTB2Q8N961 1025 aa27.56■■■□□ 2
SH3D21-201ENST00000453908 NOB1Q9ULX3 412 aaKnown RBP27.56■■■□□ 2
SH3D21-201ENST00000453908 AMPHP49418 695 aa27.56■■■□□ 2
SH3D21-201ENST00000453908 DZIP1LQ8IYY4 767 aaKnown RBP27.56■■■□□ 2
SH3D21-201ENST00000453908 ELL2O00472 640 aaPredicted RBP27.55■■■□□ 2
SH3D21-201ENST00000453908 RGS3P49796 1198 aa27.55■■■□□ 2
SH3D21-201ENST00000453908 PHF8Q9UPP1 1060 aa27.55■■■□□ 2
SH3D21-201ENST00000453908 MBIPQ9NS73 344 aa27.55■■■□□ 2
SH3D21-201ENST00000453908 CALD1Q05682 793 aaKnown RBP27.53■■■□□ 2
SH3D21-201ENST00000453908 TSPYL6Q8N831 410 aa27.53■■■□□ 2
SH3D21-201ENST00000453908 MVPQ14764 893 aaKnown RBP27.53■■■□□ 2
SH3D21-201ENST00000453908 PCDHB15Q9Y5E8 787 aa27.53■■■□□ 2
SH3D21-201ENST00000453908 GNAI1P63096 354 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 LMOD3Q0VAK6 560 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 BACH2Q9BYV9 841 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 IFT57Q9NWB7 429 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 FLT4P35916 1363 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 ESCO1Q5FWF5 840 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 SBNO1A3KN83 1393 aa27.52■■■□□ 2
SH3D21-201ENST00000453908 ATF7IPQ6VMQ6 1270 aa27.51■■□□□ 1.99
SH3D21-201ENST00000453908 ZNF853P0CG23 659 aa27.49■■□□□ 1.99
SH3D21-201ENST00000453908 NPM2Q86SE8 214 aaKnown RBP27.49■■□□□ 1.99
SH3D21-201ENST00000453908 MCM10Q7L590 875 aa27.49■■□□□ 1.99
SH3D21-201ENST00000453908 ADGRL3Q9HAR2 1447 aa27.49■■□□□ 1.99
SH3D21-201ENST00000453908 ITPRIPQ8IWB1 547 aa27.48■■□□□ 1.99
SH3D21-201ENST00000453908 CFAP44Q96MT7 982 aa27.48■■□□□ 1.99
SH3D21-201ENST00000453908 RGPD1P0DJD0 1748 aa27.48■■□□□ 1.99
SH3D21-201ENST00000453908 VAMP4O75379 141 aa27.47■■□□□ 1.99
SH3D21-201ENST00000453908 EYA1Q99502 592 aa27.46■■□□□ 1.99
SH3D21-201ENST00000453908 KIF16BQ96L93 1317 aa27.46■■□□□ 1.99
SH3D21-201ENST00000453908 FOXO3O43524 673 aa27.45■■□□□ 1.98
SH3D21-201ENST00000453908 PLEKHG5O94827 1062 aa27.45■■□□□ 1.98
SH3D21-201ENST00000453908 ALDH1L2Q3SY69 923 aa27.45■■□□□ 1.98
SH3D21-201ENST00000453908 C8orf58Q8NAV2 365 aa27.45■■□□□ 1.98
SH3D21-201ENST00000453908 ANP32AP39687 249 aaKnown RBP27.45■■□□□ 1.98
SH3D21-201ENST00000453908 TMEM57Q8N5G2 664 aa27.45■■□□□ 1.98
SH3D21-201ENST00000453908 LTV1Q96GA3 475 aaPredicted RBP27.45■■□□□ 1.98
SH3D21-201ENST00000453908 PSME1Q06323 249 aa27.44■■□□□ 1.98
SH3D21-201ENST00000453908 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
SH3D21-201ENST00000453908 ARHGEF10O15013 1369 aa27.44■■□□□ 1.98
SH3D21-201ENST00000453908 HOXC9P31274 260 aa27.43■■□□□ 1.98
SH3D21-201ENST00000453908 XPCQ01831 940 aaPredicted RBP27.43■■□□□ 1.98
SH3D21-201ENST00000453908 TWISTNBQ3B726 338 aaPredicted RBP27.43■■□□□ 1.98
SH3D21-201ENST00000453908 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
SH3D21-201ENST00000453908 IPO8O15397 1037 aaKnown RBP27.41■■□□□ 1.98
SH3D21-201ENST00000453908 AAMPQ13685 434 aa27.41■■□□□ 1.98
SH3D21-201ENST00000453908 MTHFSDQ2M296 383 aaKnown RBP27.41■■□□□ 1.98
SH3D21-201ENST00000453908 KRT24Q2M2I5 525 aa27.4■■□□□ 1.98
SH3D21-201ENST00000453908 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
SH3D21-201ENST00000453908 IGSF1Q8N6C5 1336 aa27.39■■□□□ 1.98
SH3D21-201ENST00000453908 ZBTB7CA1YPR0 619 aa27.39■■□□□ 1.97
SH3D21-201ENST00000453908 MRPL50Q8N5N7 158 aaKnown RBP27.38■■□□□ 1.97
SH3D21-201ENST00000453908 ZNF428Q96B54 188 aa27.38■■□□□ 1.97
SH3D21-201ENST00000453908 DDX19BQ9UMR2 479 aa27.38■■□□□ 1.97
SH3D21-201ENST00000453908 KDRP35968 1356 aa27.37■■□□□ 1.97
SH3D21-201ENST00000453908 MIS18AQ9NYP9 233 aa27.36■■□□□ 1.97
SH3D21-201ENST00000453908 ERICH6Q7L0X2 663 aa27.35■■□□□ 1.97
SH3D21-201ENST00000453908 RWDD1Q9H446 243 aaPredicted RBP27.35■■□□□ 1.97
SH3D21-201ENST00000453908 USHBP1Q8N6Y0 703 aa27.35■■□□□ 1.97
SH3D21-201ENST00000453908 LMOD2Q6P5Q4 547 aa27.34■■□□□ 1.97
SH3D21-201ENST00000453908 C8orf34Q49A92 452 aa27.33■■□□□ 1.97
SH3D21-201ENST00000453908 CHL1O00533 1208 aa27.33■■□□□ 1.97
SH3D21-201ENST00000453908 FAM161AQ3B820 660 aa27.33■■□□□ 1.97
SH3D21-201ENST00000453908 BRPF1P55201 1214 aaPredicted RBP27.32■■□□□ 1.96
SH3D21-201ENST00000453908 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
SH3D21-201ENST00000453908 IPO9Q96P70 1041 aaKnown RBP27.32■■□□□ 1.96
SH3D21-201ENST00000453908 PDZRN3Q9UPQ7 1066 aa27.31■■□□□ 1.96
SH3D21-201ENST00000453908 USP54Q70EL1 1684 aa27.31■■□□□ 1.96
SH3D21-201ENST00000453908 ZBTB40Q9NUA8 1239 aa27.3■■□□□ 1.96
SH3D21-201ENST00000453908 NWD1Q149M9 1564 aa27.3■■□□□ 1.96
SH3D21-201ENST00000453908 CRB1P82279 1406 aa27.29■■□□□ 1.96
SH3D21-201ENST00000453908 KIF24Q5T7B8 1368 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms