RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 POLKQ9UBT6 870 aa16.52■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 FGD1P98174 961 aa16.52■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
UBE2F-SCLY-202ENST00000449891 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 NME9Q86XW9 330 aa16.52■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 VAMP4O75379 141 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 PPLO60437 1756 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 SSFA2P28290 1259 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 KIF2CQ99661 725 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 CHAMP1Q96JM3 812 aa16.49■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 FSD2A1L4K1 749 aa16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 SMARCA5O60264 1052 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 PPIP5K1Q6PFW1 1433 aa16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 NCLP19338 710 aaKnown RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 FOXD4L5Q5VV16 416 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 FOXD4L4Q8WXT5 416 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 SETBP1Q9Y6X0 1596 aa16.47■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 FCHSD2O94868 740 aa16.46■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
UBE2F-SCLY-202ENST00000449891 AK9Q5TCS8 1911 aa16.46■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 NSD2O96028 1365 aa16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ZNF142P52746 1687 aaPredicted RBP16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 TXNDC2Q86VQ3 553 aa16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ERBB4Q15303 1308 aa16.44■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 GSPT1P15170 499 aaKnown RBP16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 PKP1Q13835 747 aa16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 DDX11L8A8MPP1 907 aa16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 TPRNQ4KMQ1 711 aa16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 MCM10Q7L590 875 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 MRE11P49959 708 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 IL16Q14005 1332 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 TSHZ3Q63HK5 1081 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 YTHDC2Q9H6S0 1430 aaKnown RBP16.41■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 TRIM44Q96DX7 344 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
UBE2F-SCLY-202ENST00000449891 DDIT3P35638 169 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 GNAI1P63096 354 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 DDX49Q9Y6V7 483 aaKnown RBP16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 GCC1Q96CN9 775 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 STRCQ7RTU9 1775 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 NEURL4Q96JN8 1562 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 IL13P35225 146 aa16.38■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 SNX21Q969T3 373 aa16.38■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 MYO5BQ9ULV0 1848 aa16.37■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 F6X3S4 739 aa16.37■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 KLHL34Q8N239 644 aa16.37■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 ESPNB1AK53 854 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 643 ms