RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
SMC6-207ENST00000448223 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
SMC6-207ENST00000448223 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
SMC6-207ENST00000448223 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
SMC6-207ENST00000448223 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
SMC6-207ENST00000448223 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.64
SMC6-207ENST00000448223 FAM184AQ8NB25 1140 aa11.02□□□□□ -0.64
SMC6-207ENST00000448223 FAM107BQ9H098 131 aa11.02□□□□□ -0.64
SMC6-207ENST00000448223 CAGE1Q8TC20 777 aa11.02□□□□□ -0.64
SMC6-207ENST00000448223 CROCC2H7BZ55 1655 aa11.02□□□□□ -0.64
SMC6-207ENST00000448223 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMC6-207ENST00000448223 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
SMC6-207ENST00000448223 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.65
SMC6-207ENST00000448223 NSD3Q9BZ95 1437 aa11.02□□□□□ -0.65
SMC6-207ENST00000448223 MNAT1P51948 309 aa11.02□□□□□ -0.65
SMC6-207ENST00000448223 LMOD3Q0VAK6 560 aa11.02□□□□□ -0.65
SMC6-207ENST00000448223 MAGI2Q86UL8 1455 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 EVC2Q86UK5 1308 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 CLGNO14967 610 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 GTPBP4Q9BZE4 634 aaKnown RBP11.01□□□□□ -0.65
SMC6-207ENST00000448223 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 CDC42BPAQ5VT25 1732 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 DYNC1I1O14576 645 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 TMEM57Q8N5G2 664 aa11.01□□□□□ -0.65
SMC6-207ENST00000448223 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
SMC6-207ENST00000448223 PANK2Q9BZ23 570 aa11□□□□□ -0.65
SMC6-207ENST00000448223 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
SMC6-207ENST00000448223 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
SMC6-207ENST00000448223 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
SMC6-207ENST00000448223 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
SMC6-207ENST00000448223 DNAAF4Q8WXU2 420 aa11□□□□□ -0.65
SMC6-207ENST00000448223 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
SMC6-207ENST00000448223 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
SMC6-207ENST00000448223 PRKAR2BP31323 418 aa11□□□□□ -0.65
SMC6-207ENST00000448223 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
SMC6-207ENST00000448223 SPC24Q8NBT2 197 aa11□□□□□ -0.65
SMC6-207ENST00000448223 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
SMC6-207ENST00000448223 RAPGEF3O95398 923 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 NAT10Q9H0A0 1025 aaKnown RBP10.99□□□□□ -0.65
SMC6-207ENST00000448223 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 REC8O95072 547 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 TRPM1Q7Z4N2 1603 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 SHTN1A0MZ66 631 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 ZNF428Q96B54 188 aa10.99□□□□□ -0.65
SMC6-207ENST00000448223 GOLGA6L10A6NI86 522 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
SMC6-207ENST00000448223 NGEFQ8N5V2 710 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 MPNDQ8N594 471 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 NUP160Q12769 1436 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 UBXN4Q92575 508 aa10.98□□□□□ -0.65
SMC6-207ENST00000448223 SAMD9LQ8IVG5 1584 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 TRIM27P14373 513 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 MCM4P33991 863 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 CCDC73Q6ZRK6 1079 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 PDILTQ8N807 584 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
SMC6-207ENST00000448223 NAP1L1P55209 391 aaKnown RBP10.97□□□□□ -0.65
SMC6-207ENST00000448223 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 ADCY10Q96PN6 1610 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
SMC6-207ENST00000448223 NF2P35240 595 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
SMC6-207ENST00000448223 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 HOOK1Q9UJC3 728 aaKnown RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 CLCN1P35523 988 aa10.96□□□□□ -0.65
SMC6-207ENST00000448223 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 CLASRPQ8N2M8 674 aaKnown RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 NOL10Q9BSC4 688 aaKnown RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 LRRCC1Q9C099 1032 aa10.96□□□□□ -0.65
SMC6-207ENST00000448223 MYO6Q9UM54 1294 aa10.96□□□□□ -0.65
SMC6-207ENST00000448223 ZNF521Q96K83 1311 aa10.96□□□□□ -0.65
SMC6-207ENST00000448223 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.65
SMC6-207ENST00000448223 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.66
SMC6-207ENST00000448223 FBXW7Q969H0 707 aa10.96□□□□□ -0.66
SMC6-207ENST00000448223 INSRP06213 1382 aa10.96□□□□□ -0.66
SMC6-207ENST00000448223 XPCQ01831 940 aaPredicted RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 ARHGEF5Q12774 1597 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 PIK3C2GO75747 1445 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 VGLL3A8MV65 326 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 ABCA8O94911 1581 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 WDR7Q9Y4E6 1490 aa10.95□□□□□ -0.66
SMC6-207ENST00000448223 POLR3GO15318 223 aaPredicted RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
SMC6-207ENST00000448223 TMCO5BA8MYB1 307 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms