RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 KNDC1Q76NI1 1749 aa7.7□□□□□ -1.18
PROM1-201ENST00000447510 POLR3AO14802 1390 aaPredicted RBP7.7□□□□□ -1.18
PROM1-201ENST00000447510 SETD1AO15047 1707 aaKnown RBP7.7□□□□□ -1.18
PROM1-201ENST00000447510 HMOX1P09601 288 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 SOS2Q07890 1332 aaPredicted RBP7.69□□□□□ -1.18
PROM1-201ENST00000447510 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
PROM1-201ENST00000447510 RAPGEF4Q8WZA2 1011 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 SBNO1A3KN83 1393 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 MAP3K19Q56UN5 1328 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 POLKQ9UBT6 870 aa7.69□□□□□ -1.18
PROM1-201ENST00000447510 CPSF1Q10570 1443 aaKnown RBP7.68□□□□□ -1.18
PROM1-201ENST00000447510 TNS3Q68CZ2 1445 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 CCDC146Q8IYE0 955 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 BTG4Q9NY30 223 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 SLC4A3P48751 1232 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 JCADQ9P266 1359 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 ANKRD24Q8TF21 1146 aa7.68□□□□□ -1.18
PROM1-201ENST00000447510 NAP1L5Q96NT1 182 aaPredicted RBP7.67□□□□□ -1.18
PROM1-201ENST00000447510 NALCNQ8IZF0 1738 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 LTBP4Q8N2S1 1624 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 GSE1Q14687 1217 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 SULT6B1Q6IMI4 303 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 USHBP1Q8N6Y0 703 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
PROM1-201ENST00000447510 IP6K1Q92551 441 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 ADGRB2O60241 1585 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 KIAA0232Q92628 1395 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 A0A0U1RQG5 324 aaPredicted RBP7.66□□□□□ -1.18
PROM1-201ENST00000447510 HOXC9P31274 260 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
PROM1-201ENST00000447510 RSPH6AQ9H0K4 717 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 NPC1L1Q9UHC9 1359 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 FLT4P35916 1363 aa7.66□□□□□ -1.18
PROM1-201ENST00000447510 TATP17735 454 aaPredicted RBP7.65□□□□□ -1.18
PROM1-201ENST00000447510 STRCP1A6NGW2 1772 aa7.65□□□□□ -1.18
PROM1-201ENST00000447510 FMN2Q9NZ56 1722 aa7.65□□□□□ -1.18
PROM1-201ENST00000447510 CCDC184Q52MB2 194 aa7.65□□□□□ -1.18
PROM1-201ENST00000447510 ARHGEF25Q86VW2 580 aa7.65□□□□□ -1.18
PROM1-201ENST00000447510 FRAT1Q92837 279 aaPredicted RBP7.65□□□□□ -1.18
PROM1-201ENST00000447510 PARD3Q8TEW0 1356 aa7.65□□□□□ -1.19
PROM1-201ENST00000447510 USP21Q9UK80 565 aa7.65□□□□□ -1.19
PROM1-201ENST00000447510 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.19
PROM1-201ENST00000447510 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
PROM1-201ENST00000447510 C1orf141Q5JVX7 400 aa7.64□□□□□ -1.19
PROM1-201ENST00000447510 RRP7AQ9Y3A4 280 aaKnown RBP7.64□□□□□ -1.19
PROM1-201ENST00000447510 ITSN1Q15811 1721 aa7.64□□□□□ -1.19
PROM1-201ENST00000447510 EIF4A2Q14240 407 aaKnown RBP7.64□□□□□ -1.19
PROM1-201ENST00000447510 DDX54Q8TDD1 881 aaKnown RBP7.63□□□□□ -1.19
PROM1-201ENST00000447510 SPATA31A6Q5VVP1 1343 aa7.63□□□□□ -1.19
PROM1-201ENST00000447510 USP31Q70CQ4 1352 aa7.63□□□□□ -1.19
PROM1-201ENST00000447510 FAM83GA6ND36 823 aa7.63□□□□□ -1.19
PROM1-201ENST00000447510 PLEKHO1Q53GL0 409 aaPredicted RBP7.63□□□□□ -1.19
PROM1-201ENST00000447510 CD163L1Q9NR16 1453 aa7.63□□□□□ -1.19
PROM1-201ENST00000447510 APAF1O14727 1248 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 PNPLA6Q8IY17 1366 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 IQSEC2Q5JU85 1478 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 PDE3BQ13370 1112 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 RUNDC1Q96C34 613 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 KIF1AQ12756 1690 aa7.62□□□□□ -1.19
PROM1-201ENST00000447510 SYTL4Q96C24 671 aaPredicted RBP7.62□□□□□ -1.19
PROM1-201ENST00000447510 RGPD8O14715 1765 aaPredicted RBP7.62□□□□□ -1.19
PROM1-201ENST00000447510 EYA1Q99502 592 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 SPG7Q9UQ90 795 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 AATKQ6ZMQ8 1374 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 FCHSD2O94868 740 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 ZNF530Q6P9A1 599 aaPredicted RBP7.61□□□□□ -1.19
PROM1-201ENST00000447510 LARP1Q6PKG0 1096 aaKnown RBP7.61□□□□□ -1.19
PROM1-201ENST00000447510 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
PROM1-201ENST00000447510 ROBO1Q9Y6N7 1651 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 RIPK4P57078 832 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 HSP90AA2PQ14568 343 aaPredicted RBP7.61□□□□□ -1.19
PROM1-201ENST00000447510 AEBP1Q8IUX7 1158 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 QTRT2Q9H974 415 aaKnown RBP7.61□□□□□ -1.19
PROM1-201ENST00000447510 USP19O94966 1318 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 AFF2P51816 1311 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 EXOC5O00471 708 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 LMOD3Q0VAK6 560 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 NFKBIBQ15653 356 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 NBPF6Q5VWK0 638 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 GAS2L2Q8NHY3 880 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 NBPF4Q96M43 638 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 AXIN2Q9Y2T1 843 aa7.61□□□□□ -1.19
PROM1-201ENST00000447510 OVOS2A0A0J9YW53 1432 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 OVOS2Q6IE36 1432 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 TEFQ10587 303 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 UNC5CLQ8IV45 518 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 TCP11L2Q8N4U5 519 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 INSRP06213 1382 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 PDE4AP27815 886 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 IL13P35225 146 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 FAM98CQ17RN3 349 aaKnown RBP7.6□□□□□ -1.19
PROM1-201ENST00000447510 TRPC5Q9UL62 973 aaPredicted RBP7.6□□□□□ -1.19
PROM1-201ENST00000447510 USP32Q8NFA0 1604 aa7.6□□□□□ -1.19
PROM1-201ENST00000447510 PXDNQ92626 1479 aa7.59□□□□□ -1.19
PROM1-201ENST00000447510 IL2RBP14784 551 aa7.59□□□□□ -1.19
PROM1-201ENST00000447510 ZNF772Q68DY9 489 aaPredicted RBP7.59□□□□□ -1.19
PROM1-201ENST00000447510 SSH2Q76I76 1423 aa7.59□□□□□ -1.19
PROM1-201ENST00000447510 ERBB3P21860 1342 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms