RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
SDCBP-204ENST00000447182 MRE11P49959 708 aa23.86■■□□□ 1.41
SDCBP-204ENST00000447182 ANKRD45Q5TZF3 282 aa23.86■■□□□ 1.41
SDCBP-204ENST00000447182 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
SDCBP-204ENST00000447182 GZF1Q9H116 711 aaPredicted RBP23.86■■□□□ 1.41
SDCBP-204ENST00000447182 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
SDCBP-204ENST00000447182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
SDCBP-204ENST00000447182 TSPYL6Q8N831 410 aa23.83■■□□□ 1.41
SDCBP-204ENST00000447182 IL13P35225 146 aa23.83■■□□□ 1.4
SDCBP-204ENST00000447182 CPSF1Q10570 1443 aaKnown RBP23.83■■□□□ 1.4
SDCBP-204ENST00000447182 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.4
SDCBP-204ENST00000447182 SIRT2Q8IXJ6 389 aa23.82■■□□□ 1.4
SDCBP-204ENST00000447182 SETD1AO15047 1707 aaKnown RBP23.82■■□□□ 1.4
SDCBP-204ENST00000447182 KIF24Q5T7B8 1368 aa23.82■■□□□ 1.4
SDCBP-204ENST00000447182 AATKQ6ZMQ8 1374 aa23.82■■□□□ 1.4
SDCBP-204ENST00000447182 HSP90AB1P08238 724 aaKnown RBP23.81■■□□□ 1.4
SDCBP-204ENST00000447182 RAB3GAP1Q15042 981 aa23.81■■□□□ 1.4
SDCBP-204ENST00000447182 TNPO1Q92973 898 aaKnown RBP23.81■■□□□ 1.4
SDCBP-204ENST00000447182 MBIPQ9NS73 344 aa23.81■■□□□ 1.4
SDCBP-204ENST00000447182 HMOX1P09601 288 aa23.81■■□□□ 1.4
SDCBP-204ENST00000447182 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
SDCBP-204ENST00000447182 TBC1D9Q6ZT07 1266 aa23.81■■□□□ 1.4
SDCBP-204ENST00000447182 PTMSP20962 102 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 FBLN1P23142 703 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 THUMPD2Q9BTF0 503 aaKnown RBP23.8■■□□□ 1.4
SDCBP-204ENST00000447182 PANK2Q9BZ23 570 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 RIMBP3CA6NJZ7 1639 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 RIMBP3BA6NNM3 1639 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 RIMBP3Q9UFD9 1639 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 LMOD3Q0VAK6 560 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 CFAP44Q96MT7 982 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 GBP4Q96PP9 640 aa23.8■■□□□ 1.4
SDCBP-204ENST00000447182 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
SDCBP-204ENST00000447182 C1orf115Q9H7X2 142 aa23.79■■□□□ 1.4
SDCBP-204ENST00000447182 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
SDCBP-204ENST00000447182 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
SDCBP-204ENST00000447182 TWISTNBQ3B726 338 aaPredicted RBP23.78■■□□□ 1.4
SDCBP-204ENST00000447182 EMILIN1Q9Y6C2 1016 aa23.78■■□□□ 1.4
SDCBP-204ENST00000447182 K7ELQ4 463 aaPredicted RBP23.77■■□□□ 1.4
SDCBP-204ENST00000447182 SKOR2Q2VWA4 1001 aaPredicted RBP23.77■■□□□ 1.4
SDCBP-204ENST00000447182 GRPEL1Q9HAV7 217 aa23.77■■□□□ 1.4
SDCBP-204ENST00000447182 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
SDCBP-204ENST00000447182 ARXQ96QS3 562 aa23.76■■□□□ 1.39
SDCBP-204ENST00000447182 STAG3Q9UJ98 1225 aa23.76■■□□□ 1.39
SDCBP-204ENST00000447182 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
SDCBP-204ENST00000447182 CDC45O75419 566 aa23.75■■□□□ 1.39
SDCBP-204ENST00000447182 RIMS2Q9UQ26 1411 aa23.74■■□□□ 1.39
SDCBP-204ENST00000447182 CD2BP2O95400 341 aaKnown RBP23.74■■□□□ 1.39
SDCBP-204ENST00000447182 CLCN1P35523 988 aa23.74■■□□□ 1.39
SDCBP-204ENST00000447182 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
SDCBP-204ENST00000447182 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
SDCBP-204ENST00000447182 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
SDCBP-204ENST00000447182 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-204ENST00000447182 PRKCSHP14314 528 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-204ENST00000447182 WASLO00401 505 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-204ENST00000447182 CLEC17AQ6ZS10 378 aa23.72■■□□□ 1.39
SDCBP-204ENST00000447182 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
SDCBP-204ENST00000447182 NME9Q86XW9 330 aa23.71■■□□□ 1.39
SDCBP-204ENST00000447182 SPATA31D1Q6ZQQ2 1576 aa23.71■■□□□ 1.39
SDCBP-204ENST00000447182 HSP90AA1P07900 732 aaKnown RBP23.71■■□□□ 1.39
SDCBP-204ENST00000447182 DCTPP1Q9H773 170 aa23.71■■□□□ 1.39
SDCBP-204ENST00000447182 PLEKHM2Q8IWE5 1019 aa23.7■■□□□ 1.38
SDCBP-204ENST00000447182 GSPT1P15170 499 aaKnown RBP23.69■■□□□ 1.38
SDCBP-204ENST00000447182 INTS3Q68E01 1043 aaKnown RBP23.69■■□□□ 1.38
SDCBP-204ENST00000447182 AGLP35573 1532 aa23.68■■□□□ 1.38
SDCBP-204ENST00000447182 COG3Q96JB2 828 aa23.68■■□□□ 1.38
SDCBP-204ENST00000447182 NRXN3Q9Y4C0 1643 aa23.67■■□□□ 1.38
SDCBP-204ENST00000447182 RBM42Q9BTD8 480 aaKnown RBP23.67■■□□□ 1.38
SDCBP-204ENST00000447182 C3P01024 1663 aa23.67■■□□□ 1.38
SDCBP-204ENST00000447182 NRKQ7Z2Y5 1582 aa23.66■■□□□ 1.38
SDCBP-204ENST00000447182 CPS1P31327 1500 aa23.66■■□□□ 1.38
SDCBP-204ENST00000447182 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
SDCBP-204ENST00000447182 GAS2L2Q8NHY3 880 aa23.66■■□□□ 1.38
SDCBP-204ENST00000447182 AKAP12Q02952 1782 aa23.66■■□□□ 1.38
SDCBP-204ENST00000447182 RABEP1Q15276 862 aa23.65■■□□□ 1.38
SDCBP-204ENST00000447182 TTC22Q5TAA0 569 aa23.65■■□□□ 1.38
SDCBP-204ENST00000447182 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
SDCBP-204ENST00000447182 ATP10DQ9P241 1426 aa23.65■■□□□ 1.38
SDCBP-204ENST00000447182 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
SDCBP-204ENST00000447182 GAS2L3Q86XJ1 694 aa23.64■■□□□ 1.37
SDCBP-204ENST00000447182 ANKRD44Q8N8A2 993 aa23.64■■□□□ 1.37
SDCBP-204ENST00000447182 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
SDCBP-204ENST00000447182 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
SDCBP-204ENST00000447182 RGS12O14924 1447 aa23.63■■□□□ 1.37
SDCBP-204ENST00000447182 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
SDCBP-204ENST00000447182 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
SDCBP-204ENST00000447182 IBTKQ9P2D0 1353 aaPredicted RBP23.62■■□□□ 1.37
SDCBP-204ENST00000447182 GOLGA6L22H0YM25 854 aa23.62■■□□□ 1.37
SDCBP-204ENST00000447182 RRS1Q15050 365 aaKnown RBP23.62■■□□□ 1.37
SDCBP-204ENST00000447182 SSFA2P28290 1259 aa23.62■■□□□ 1.37
SDCBP-204ENST00000447182 FOXD4L1Q9NU39 408 aa23.62■■□□□ 1.37
SDCBP-204ENST00000447182 ITSN1Q15811 1721 aa23.61■■□□□ 1.37
SDCBP-204ENST00000447182 TECPR2O15040 1411 aa23.61■■□□□ 1.37
SDCBP-204ENST00000447182 KIAA0232Q92628 1395 aa23.61■■□□□ 1.37
SDCBP-204ENST00000447182 USP26Q9BXU7 913 aa23.6■■□□□ 1.37
SDCBP-204ENST00000447182 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
SDCBP-204ENST00000447182 METP08581 1390 aa23.6■■□□□ 1.37
SDCBP-204ENST00000447182 CHL1O00533 1208 aa23.59■■□□□ 1.37
SDCBP-204ENST00000447182 ESPNB1AK53 854 aa23.59■■□□□ 1.37
SDCBP-204ENST00000447182 KLHL40Q2TBA0 621 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms