RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
HDAC11-214ENST00000446613 LRRC7Q96NW7 1537 aa20.32■□□□□ 0.84
HDAC11-214ENST00000446613 GOLGA6L22H0YM25 854 aa20.32■□□□□ 0.84
HDAC11-214ENST00000446613 CDC45O75419 566 aa20.32■□□□□ 0.84
HDAC11-214ENST00000446613 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
HDAC11-214ENST00000446613 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
HDAC11-214ENST00000446613 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
HDAC11-214ENST00000446613 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
HDAC11-214ENST00000446613 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
HDAC11-214ENST00000446613 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
HDAC11-214ENST00000446613 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
HDAC11-214ENST00000446613 RBM10P98175 930 aaKnown RBP20.3■□□□□ 0.84
HDAC11-214ENST00000446613 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
HDAC11-214ENST00000446613 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
HDAC11-214ENST00000446613 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
HDAC11-214ENST00000446613 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
HDAC11-214ENST00000446613 ZSCAN30Q86W11 494 aa20.3■□□□□ 0.84
HDAC11-214ENST00000446613 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
HDAC11-214ENST00000446613 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 FCHSD2O94868 740 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 IDI1Q13907 227 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 ZSCAN23Q3MJ62 389 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 RBSNQ9H1K0 784 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
HDAC11-214ENST00000446613 PUS7Q96PZ0 661 aaKnown RBP20.28■□□□□ 0.84
HDAC11-214ENST00000446613 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
HDAC11-214ENST00000446613 SMARCA5O60264 1052 aaPredicted RBP20.28■□□□□ 0.84
HDAC11-214ENST00000446613 TWISTNBQ3B726 338 aaPredicted RBP20.27■□□□□ 0.84
HDAC11-214ENST00000446613 LMBRD1Q9NUN5 540 aa20.27■□□□□ 0.84
HDAC11-214ENST00000446613 EMILIN1Q9Y6C2 1016 aa20.27■□□□□ 0.84
HDAC11-214ENST00000446613 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.83
HDAC11-214ENST00000446613 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.83
HDAC11-214ENST00000446613 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
HDAC11-214ENST00000446613 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
HDAC11-214ENST00000446613 ABCC4O15439 1325 aa20.26■□□□□ 0.83
HDAC11-214ENST00000446613 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
HDAC11-214ENST00000446613 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
HDAC11-214ENST00000446613 SIGLEC1Q9BZZ2 1709 aa20.25■□□□□ 0.83
HDAC11-214ENST00000446613 CALD1Q05682 793 aaKnown RBP20.25■□□□□ 0.83
HDAC11-214ENST00000446613 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
HDAC11-214ENST00000446613 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
HDAC11-214ENST00000446613 CLEC17AQ6ZS10 378 aa20.25■□□□□ 0.83
HDAC11-214ENST00000446613 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
HDAC11-214ENST00000446613 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
HDAC11-214ENST00000446613 GPT2Q8TD30 523 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 FRMPD1Q5SYB0 1578 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 PTCH1Q13635 1447 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 FAM135BQ49AJ0 1406 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 TPM2P07951 284 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 PTMSP20962 102 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
HDAC11-214ENST00000446613 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
HDAC11-214ENST00000446613 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
HDAC11-214ENST00000446613 RABEP1Q15276 862 aa20.23■□□□□ 0.83
HDAC11-214ENST00000446613 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
HDAC11-214ENST00000446613 HDGFL2Q7Z4V5 671 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-214ENST00000446613 ARID3AQ99856 593 aa20.23■□□□□ 0.83
HDAC11-214ENST00000446613 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 OFD1O75665 1012 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-214ENST00000446613 ARHGAP45Q92619 1136 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.22■□□□□ 0.83
HDAC11-214ENST00000446613 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
HDAC11-214ENST00000446613 SDSP20132 328 aa20.21■□□□□ 0.83
HDAC11-214ENST00000446613 ZNF445P59923 1031 aa20.21■□□□□ 0.83
HDAC11-214ENST00000446613 RAPGEF3O95398 923 aa20.21■□□□□ 0.83
HDAC11-214ENST00000446613 ABCC3O15438 1527 aa20.2■□□□□ 0.82
HDAC11-214ENST00000446613 GNAI1P63096 354 aa20.2■□□□□ 0.82
HDAC11-214ENST00000446613 DCTPP1Q9H773 170 aa20.2■□□□□ 0.82
HDAC11-214ENST00000446613 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-214ENST00000446613 PTPRMP28827 1452 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 SYCE3A1L190 88 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 NUCB2P80303 420 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 TMEM63CQ9P1W3 806 aa20.19■□□□□ 0.82
HDAC11-214ENST00000446613 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
HDAC11-214ENST00000446613 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 NOL8Q76FK4 1167 aaKnown RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 NME9Q86XW9 330 aa20.17■□□□□ 0.82
HDAC11-214ENST00000446613 PDCL3Q9H2J4 239 aa20.17■□□□□ 0.82
HDAC11-214ENST00000446613 CHMP4BQ9H444 224 aaKnown RBP20.17■□□□□ 0.82
HDAC11-214ENST00000446613 HECW2Q9P2P5 1572 aa20.16■□□□□ 0.82
HDAC11-214ENST00000446613 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
HDAC11-214ENST00000446613 MPNDQ8N594 471 aa20.16■□□□□ 0.82
HDAC11-214ENST00000446613 ANKRD26Q9UPS8 1709 aa20.16■□□□□ 0.82
HDAC11-214ENST00000446613 API5Q9BZZ5 524 aaKnown RBP20.15■□□□□ 0.82
HDAC11-214ENST00000446613 IL13P35225 146 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms