RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
ERCC3-203ENST00000445889 FOXD4L5Q5VV16 416 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-203ENST00000445889 FOXD4L4Q8WXT5 416 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-203ENST00000445889 PPLO60437 1756 aa17.67■□□□□ 0.42
ERCC3-203ENST00000445889 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
ERCC3-203ENST00000445889 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
ERCC3-203ENST00000445889 SOX12O15370 315 aa17.66■□□□□ 0.42
ERCC3-203ENST00000445889 DDX49Q9Y6V7 483 aaKnown RBP17.66■□□□□ 0.42
ERCC3-203ENST00000445889 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
ERCC3-203ENST00000445889 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 FRMPD1Q5SYB0 1578 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 PLEKHM2Q8IWE5 1019 aa17.65■□□□□ 0.42
ERCC3-203ENST00000445889 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.42
ERCC3-203ENST00000445889 ABCC3O15438 1527 aa17.64■□□□□ 0.41
ERCC3-203ENST00000445889 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
ERCC3-203ENST00000445889 CDC45O75419 566 aa17.63■□□□□ 0.41
ERCC3-203ENST00000445889 GNAI1P63096 354 aa17.63■□□□□ 0.41
ERCC3-203ENST00000445889 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
ERCC3-203ENST00000445889 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
ERCC3-203ENST00000445889 BAG4O95429 457 aaKnown RBP17.62■□□□□ 0.41
ERCC3-203ENST00000445889 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
ERCC3-203ENST00000445889 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
ERCC3-203ENST00000445889 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
ERCC3-203ENST00000445889 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 IL13P35225 146 aa17.61■□□□□ 0.41
ERCC3-203ENST00000445889 MLECQ14165 292 aa17.61■□□□□ 0.41
ERCC3-203ENST00000445889 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
ERCC3-203ENST00000445889 TSHZ3Q63HK5 1081 aa17.61■□□□□ 0.41
ERCC3-203ENST00000445889 MCM10Q7L590 875 aa17.61■□□□□ 0.41
ERCC3-203ENST00000445889 SLC52A1Q9NWF4 448 aa17.6■□□□□ 0.41
ERCC3-203ENST00000445889 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
ERCC3-203ENST00000445889 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
ERCC3-203ENST00000445889 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
ERCC3-203ENST00000445889 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
ERCC3-203ENST00000445889 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
ERCC3-203ENST00000445889 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
ERCC3-203ENST00000445889 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
ERCC3-203ENST00000445889 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
ERCC3-203ENST00000445889 ABCC4O15439 1325 aa17.59■□□□□ 0.41
ERCC3-203ENST00000445889 PTPRMP28827 1452 aa17.58■□□□□ 0.41
ERCC3-203ENST00000445889 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.41
ERCC3-203ENST00000445889 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
ERCC3-203ENST00000445889 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
ERCC3-203ENST00000445889 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
ERCC3-203ENST00000445889 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.4
ERCC3-203ENST00000445889 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.4
ERCC3-203ENST00000445889 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
ERCC3-203ENST00000445889 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
ERCC3-203ENST00000445889 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
ERCC3-203ENST00000445889 SDSP20132 328 aa17.57■□□□□ 0.4
ERCC3-203ENST00000445889 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
ERCC3-203ENST00000445889 MEIS3Q99687 375 aa17.57■□□□□ 0.4
ERCC3-203ENST00000445889 PRPF40AO75400 957 aaKnown RBP17.57■□□□□ 0.4
ERCC3-203ENST00000445889 ISY1Q9ULR0 285 aaKnown RBP17.57■□□□□ 0.4
ERCC3-203ENST00000445889 TTC22Q5TAA0 569 aa17.56■□□□□ 0.4
ERCC3-203ENST00000445889 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
ERCC3-203ENST00000445889 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
ERCC3-203ENST00000445889 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
ERCC3-203ENST00000445889 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
ERCC3-203ENST00000445889 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
ERCC3-203ENST00000445889 F6X3S4 739 aa17.55■□□□□ 0.4
ERCC3-203ENST00000445889 BRPF1P55201 1214 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-203ENST00000445889 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
ERCC3-203ENST00000445889 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
ERCC3-203ENST00000445889 MLH3Q9UHC1 1453 aa17.55■□□□□ 0.4
ERCC3-203ENST00000445889 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
ERCC3-203ENST00000445889 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
ERCC3-203ENST00000445889 MED14O60244 1454 aa17.53■□□□□ 0.4
ERCC3-203ENST00000445889 COG3Q96JB2 828 aa17.53■□□□□ 0.4
ERCC3-203ENST00000445889 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
ERCC3-203ENST00000445889 NECTIN2Q92692 538 aa17.53■□□□□ 0.4
ERCC3-203ENST00000445889 KLHL40Q2TBA0 621 aa17.52■□□□□ 0.4
ERCC3-203ENST00000445889 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
ERCC3-203ENST00000445889 HECW2Q9P2P5 1572 aa17.52■□□□□ 0.4
ERCC3-203ENST00000445889 RABEP1Q15276 862 aa17.52■□□□□ 0.4
ERCC3-203ENST00000445889 CEP85Q6P2H3 762 aa17.52■□□□□ 0.4
ERCC3-203ENST00000445889 NSFL1CQ9UNZ2 370 aaKnown RBP17.52■□□□□ 0.4
ERCC3-203ENST00000445889 PTCH1Q13635 1447 aa17.52■□□□□ 0.39
ERCC3-203ENST00000445889 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
ERCC3-203ENST00000445889 CFAP74Q9C0B2 1584 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 ZSCAN23Q3MJ62 389 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 LMBRD1Q9NUN5 540 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 FOXO3O43524 673 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 G2E3Q7L622 706 aa17.51■□□□□ 0.39
ERCC3-203ENST00000445889 GLIPR1L2Q4G1C9 344 aa17.5■□□□□ 0.39
ERCC3-203ENST00000445889 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
ERCC3-203ENST00000445889 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
ERCC3-203ENST00000445889 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
ERCC3-203ENST00000445889 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
ERCC3-203ENST00000445889 ZDHHC9Q9Y397 364 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 659.6 ms