RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 USP6P35125 1406 aa18.11■□□□□ 0.49
NCLP1-201ENST00000445357 TTC21BQ7Z4L5 1316 aa18.11■□□□□ 0.49
NCLP1-201ENST00000445357 CALD1Q05682 793 aaKnown RBP18.1■□□□□ 0.49
NCLP1-201ENST00000445357 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
NCLP1-201ENST00000445357 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
NCLP1-201ENST00000445357 ACEP12821 1306 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 KIF16BQ96L93 1317 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 HMOX1P09601 288 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 TRIM27P14373 513 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 ATF7IPQ6VMQ6 1270 aa18.09■□□□□ 0.49
NCLP1-201ENST00000445357 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.49
NCLP1-201ENST00000445357 PEAK1Q9H792 1746 aa18.08■□□□□ 0.48
NCLP1-201ENST00000445357 RWDD1Q9H446 243 aaPredicted RBP18.08■□□□□ 0.48
NCLP1-201ENST00000445357 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
NCLP1-201ENST00000445357 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
NCLP1-201ENST00000445357 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
NCLP1-201ENST00000445357 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
NCLP1-201ENST00000445357 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
NCLP1-201ENST00000445357 DDX19BQ9UMR2 479 aa18.06■□□□□ 0.48
NCLP1-201ENST00000445357 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
NCLP1-201ENST00000445357 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
NCLP1-201ENST00000445357 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
NCLP1-201ENST00000445357 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
NCLP1-201ENST00000445357 GNAI1P63096 354 aa18.05■□□□□ 0.48
NCLP1-201ENST00000445357 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
NCLP1-201ENST00000445357 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
NCLP1-201ENST00000445357 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
NCLP1-201ENST00000445357 CEP170BQ9Y4F5 1589 aaPredicted RBP18.03■□□□□ 0.48
NCLP1-201ENST00000445357 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
NCLP1-201ENST00000445357 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
NCLP1-201ENST00000445357 USP54Q70EL1 1684 aa18.02■□□□□ 0.48
NCLP1-201ENST00000445357 HDAC1Q13547 482 aaPredicted RBP18.02■□□□□ 0.47
NCLP1-201ENST00000445357 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
NCLP1-201ENST00000445357 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
NCLP1-201ENST00000445357 ITPRIPQ8IWB1 547 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 TMEM57Q8N5G2 664 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 PIK3C2AO00443 1686 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 VAMP4O75379 141 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 HSPA2P54652 639 aa18■□□□□ 0.47
NCLP1-201ENST00000445357 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
NCLP1-201ENST00000445357 ARHGAP45Q92619 1136 aa17.99■□□□□ 0.47
NCLP1-201ENST00000445357 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
NCLP1-201ENST00000445357 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
NCLP1-201ENST00000445357 ZBTB40Q9NUA8 1239 aa17.99■□□□□ 0.47
NCLP1-201ENST00000445357 LAS1LQ9Y4W2 734 aaKnown RBP17.99■□□□□ 0.47
NCLP1-201ENST00000445357 ZNF142P52746 1687 aaPredicted RBP17.98■□□□□ 0.47
NCLP1-201ENST00000445357 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
NCLP1-201ENST00000445357 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
NCLP1-201ENST00000445357 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
NCLP1-201ENST00000445357 LMTK3Q96Q04 1460 aa17.97■□□□□ 0.47
NCLP1-201ENST00000445357 USP19O94966 1318 aa17.96■□□□□ 0.47
NCLP1-201ENST00000445357 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
NCLP1-201ENST00000445357 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
NCLP1-201ENST00000445357 AEBP1Q8IUX7 1158 aa17.95■□□□□ 0.46
NCLP1-201ENST00000445357 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
NCLP1-201ENST00000445357 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
NCLP1-201ENST00000445357 TSPYL6Q8N831 410 aa17.95■□□□□ 0.46
NCLP1-201ENST00000445357 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
NCLP1-201ENST00000445357 NBR1Q14596 966 aa17.94■□□□□ 0.46
NCLP1-201ENST00000445357 FLT4P35916 1363 aa17.93■□□□□ 0.46
NCLP1-201ENST00000445357 TWISTNBQ3B726 338 aaPredicted RBP17.93■□□□□ 0.46
NCLP1-201ENST00000445357 CHMP4BQ9H444 224 aaKnown RBP17.93■□□□□ 0.46
NCLP1-201ENST00000445357 ABCC4O15439 1325 aa17.93■□□□□ 0.46
NCLP1-201ENST00000445357 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
NCLP1-201ENST00000445357 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
NCLP1-201ENST00000445357 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
NCLP1-201ENST00000445357 KDRP35968 1356 aa17.92■□□□□ 0.46
NCLP1-201ENST00000445357 NGDNQ8NEJ9 315 aaKnown RBP17.91■□□□□ 0.46
NCLP1-201ENST00000445357 C8orf58Q8NAV2 365 aa17.91■□□□□ 0.46
NCLP1-201ENST00000445357 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
NCLP1-201ENST00000445357 KCNA6P17658 529 aa17.9■□□□□ 0.46
NCLP1-201ENST00000445357 KIAA0232Q92628 1395 aa17.9■□□□□ 0.46
NCLP1-201ENST00000445357 SEC24BO95487 1268 aa17.9■□□□□ 0.46
NCLP1-201ENST00000445357 ZBTB7BO15156 539 aaPredicted RBP17.89■□□□□ 0.45
NCLP1-201ENST00000445357 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
NCLP1-201ENST00000445357 CHL1O00533 1208 aa17.88■□□□□ 0.45
NCLP1-201ENST00000445357 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
NCLP1-201ENST00000445357 RTL5Q5HYW3 569 aaPredicted RBP17.88■□□□□ 0.45
NCLP1-201ENST00000445357 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
NCLP1-201ENST00000445357 CRB1P82279 1406 aa17.88■□□□□ 0.45
NCLP1-201ENST00000445357 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
NCLP1-201ENST00000445357 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
NCLP1-201ENST00000445357 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
NCLP1-201ENST00000445357 ELL2O00472 640 aaPredicted RBP17.87■□□□□ 0.45
NCLP1-201ENST00000445357 IGSF1Q8N6C5 1336 aa17.87■□□□□ 0.45
NCLP1-201ENST00000445357 NUCB1Q02818 461 aa17.86■□□□□ 0.45
NCLP1-201ENST00000445357 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
NCLP1-201ENST00000445357 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
NCLP1-201ENST00000445357 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
NCLP1-201ENST00000445357 SOX12O15370 315 aa17.84■□□□□ 0.45
NCLP1-201ENST00000445357 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
NCLP1-201ENST00000445357 RGS12O14924 1447 aa17.83■□□□□ 0.45
NCLP1-201ENST00000445357 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms