RNA–Protein interactions for RNA: ENST00000445215.5

POLDIP3-204, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best)

Gene POLDIP3, Length 3,337 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-204ENST00000445215 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
POLDIP3-204ENST00000445215 FLT4P35916 1363 aa12.18□□□□□ -0.46
POLDIP3-204ENST00000445215 SHPRHQ149N8 1683 aa12.18□□□□□ -0.46
POLDIP3-204ENST00000445215 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 MST1RQ04912 1400 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 E9PSI1 815 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 RIPK4P57078 832 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 SULT6B1Q6IMI4 303 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
POLDIP3-204ENST00000445215 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
POLDIP3-204ENST00000445215 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
POLDIP3-204ENST00000445215 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
POLDIP3-204ENST00000445215 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
POLDIP3-204ENST00000445215 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
POLDIP3-204ENST00000445215 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
POLDIP3-204ENST00000445215 PIK3C2AO00443 1686 aa12.15□□□□□ -0.47
POLDIP3-204ENST00000445215 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 HOXC9P31274 260 aa12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
POLDIP3-204ENST00000445215 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 GCP02774 474 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 AEBP2Q6ZN18 517 aaPredicted RBP12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 ZNF521Q96K83 1311 aa12.13□□□□□ -0.47
POLDIP3-204ENST00000445215 LMOD3Q0VAK6 560 aa12.12□□□□□ -0.47
POLDIP3-204ENST00000445215 DUSP27Q5VZP5 1158 aa12.12□□□□□ -0.47
POLDIP3-204ENST00000445215 EXOC6Q8TAG9 804 aa12.12□□□□□ -0.47
POLDIP3-204ENST00000445215 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
POLDIP3-204ENST00000445215 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
POLDIP3-204ENST00000445215 PLIN1O60240 522 aa12.11□□□□□ -0.47
POLDIP3-204ENST00000445215 CCDC27Q2M243 656 aa12.11□□□□□ -0.47
POLDIP3-204ENST00000445215 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
POLDIP3-204ENST00000445215 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 IP6K1Q92551 441 aa12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 KIF24Q5T7B8 1368 aa12.1□□□□□ -0.47
POLDIP3-204ENST00000445215 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
POLDIP3-204ENST00000445215 EYA1Q99502 592 aa12.09□□□□□ -0.47
POLDIP3-204ENST00000445215 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
POLDIP3-204ENST00000445215 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
POLDIP3-204ENST00000445215 ARHGEF10O15013 1369 aa12.09□□□□□ -0.47
POLDIP3-204ENST00000445215 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
POLDIP3-204ENST00000445215 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
POLDIP3-204ENST00000445215 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
POLDIP3-204ENST00000445215 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
POLDIP3-204ENST00000445215 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
POLDIP3-204ENST00000445215 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
POLDIP3-204ENST00000445215 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
POLDIP3-204ENST00000445215 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
POLDIP3-204ENST00000445215 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
POLDIP3-204ENST00000445215 USP19O94966 1318 aa12.06□□□□□ -0.48
POLDIP3-204ENST00000445215 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
POLDIP3-204ENST00000445215 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
POLDIP3-204ENST00000445215 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 CHRNA2Q15822 529 aa12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 PRDM11Q9NQV5 511 aa12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
POLDIP3-204ENST00000445215 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 GNAI1P63096 354 aa12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 IL16Q14005 1332 aa12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 TRMT2AQ8IZ69 625 aaKnown RBP12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 NFAT5O94916 1531 aa12.04□□□□□ -0.48
POLDIP3-204ENST00000445215 XIRP1Q702N8 1843 aaKnown RBP12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 MCM10Q7L590 875 aa12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 BCL2L13Q9BXK5 485 aa12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
POLDIP3-204ENST00000445215 TRPM3Q9HCF6 1732 aaPredicted RBP12.02□□□□□ -0.49
POLDIP3-204ENST00000445215 PXDNQ92626 1479 aa12.02□□□□□ -0.49
POLDIP3-204ENST00000445215 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
POLDIP3-204ENST00000445215 LTN1O94822 1766 aa12.01□□□□□ -0.49
POLDIP3-204ENST00000445215 RNF123Q5XPI4 1314 aa12.01□□□□□ -0.49
POLDIP3-204ENST00000445215 BCAR3O75815 825 aa12.01□□□□□ -0.49
POLDIP3-204ENST00000445215 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms