RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 FLT4P35916 1363 aa24.4■■□□□ 1.5
SEMA3D-202ENST00000444867 LMOD3Q0VAK6 560 aa24.4■■□□□ 1.5
SEMA3D-202ENST00000444867 PHACTR3Q96KR7 559 aa24.39■■□□□ 1.49
SEMA3D-202ENST00000444867 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
SEMA3D-202ENST00000444867 CANXP27824 592 aaKnown RBP24.37■■□□□ 1.49
SEMA3D-202ENST00000444867 ARHGEF10O15013 1369 aa24.37■■□□□ 1.49
SEMA3D-202ENST00000444867 NLRP6P59044 892 aa24.36■■□□□ 1.49
SEMA3D-202ENST00000444867 RBM19Q9Y4C8 960 aaKnown RBP24.36■■□□□ 1.49
SEMA3D-202ENST00000444867 TSR2Q969E8 191 aaKnown RBP24.35■■□□□ 1.49
SEMA3D-202ENST00000444867 EXOSC9Q06265 439 aaKnown RBP24.34■■□□□ 1.49
SEMA3D-202ENST00000444867 KIF1AQ12756 1690 aa24.33■■□□□ 1.49
SEMA3D-202ENST00000444867 AAMPQ13685 434 aa24.33■■□□□ 1.49
SEMA3D-202ENST00000444867 HSP90AB2PQ58FF8 381 aa24.33■■□□□ 1.49
SEMA3D-202ENST00000444867 C14orf37Q86TY3 774 aa24.32■■□□□ 1.48
SEMA3D-202ENST00000444867 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
SEMA3D-202ENST00000444867 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
SEMA3D-202ENST00000444867 IFT57Q9NWB7 429 aa24.32■■□□□ 1.48
SEMA3D-202ENST00000444867 GNAI1P63096 354 aa24.31■■□□□ 1.48
SEMA3D-202ENST00000444867 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
SEMA3D-202ENST00000444867 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
SEMA3D-202ENST00000444867 MS4A1P11836 297 aa24.3■■□□□ 1.48
SEMA3D-202ENST00000444867 AMPHP49418 695 aa24.3■■□□□ 1.48
SEMA3D-202ENST00000444867 CENPQQ7L2Z9 268 aaPredicted RBP24.3■■□□□ 1.48
SEMA3D-202ENST00000444867 PROSER2Q86WR7 435 aaPredicted RBP24.3■■□□□ 1.48
SEMA3D-202ENST00000444867 ESCO1Q5FWF5 840 aa24.29■■□□□ 1.48
SEMA3D-202ENST00000444867 RBM33Q96EV2 1170 aaKnown RBP24.29■■□□□ 1.48
SEMA3D-202ENST00000444867 LTN1O94822 1766 aa24.29■■□□□ 1.48
SEMA3D-202ENST00000444867 NCOA3Q9Y6Q9 1424 aa24.29■■□□□ 1.48
SEMA3D-202ENST00000444867 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
SEMA3D-202ENST00000444867 SOX12O15370 315 aa24.28■■□□□ 1.48
SEMA3D-202ENST00000444867 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
SEMA3D-202ENST00000444867 FRAT1Q92837 279 aaPredicted RBP24.28■■□□□ 1.48
SEMA3D-202ENST00000444867 KDRP35968 1356 aa24.28■■□□□ 1.48
SEMA3D-202ENST00000444867 ZNF853P0CG23 659 aa24.27■■□□□ 1.48
SEMA3D-202ENST00000444867 PSME1Q06323 249 aa24.27■■□□□ 1.48
SEMA3D-202ENST00000444867 AEBP1Q8IUX7 1158 aa24.27■■□□□ 1.48
SEMA3D-202ENST00000444867 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
SEMA3D-202ENST00000444867 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
SEMA3D-202ENST00000444867 ALDH1L2Q3SY69 923 aa24.26■■□□□ 1.47
SEMA3D-202ENST00000444867 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
SEMA3D-202ENST00000444867 IGSF1Q8N6C5 1336 aa24.26■■□□□ 1.47
SEMA3D-202ENST00000444867 C19orf44Q9H6X5 657 aa24.25■■□□□ 1.47
SEMA3D-202ENST00000444867 NFAT5O94916 1531 aa24.25■■□□□ 1.47
SEMA3D-202ENST00000444867 STRCP1A6NGW2 1772 aa24.25■■□□□ 1.47
SEMA3D-202ENST00000444867 PANK1Q8TE04 598 aa24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 SMC4Q9NTJ3 1288 aa24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 TRPM3Q9HCF6 1732 aaPredicted RBP24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 DCCP43146 1447 aa24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 HOXC9P31274 260 aa24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 CFAP44Q96MT7 982 aa24.24■■□□□ 1.47
SEMA3D-202ENST00000444867 BCL2L13Q9BXK5 485 aa24.23■■□□□ 1.47
SEMA3D-202ENST00000444867 KCNH5Q8NCM2 988 aa24.22■■□□□ 1.47
SEMA3D-202ENST00000444867 SSH1Q8WYL5 1049 aa24.22■■□□□ 1.47
SEMA3D-202ENST00000444867 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
SEMA3D-202ENST00000444867 C1orf167Q5SNV9 1468 aa24.22■■□□□ 1.47
SEMA3D-202ENST00000444867 BRPF1P55201 1214 aaPredicted RBP24.21■■□□□ 1.47
SEMA3D-202ENST00000444867 NUTM2GQ5VZR2 741 aa24.21■■□□□ 1.47
SEMA3D-202ENST00000444867 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
SEMA3D-202ENST00000444867 KIF16BQ96L93 1317 aa24.21■■□□□ 1.47
SEMA3D-202ENST00000444867 LAS1LQ9Y4W2 734 aaKnown RBP24.21■■□□□ 1.47
SEMA3D-202ENST00000444867 SLIT3O75094 1523 aa24.2■■□□□ 1.46
SEMA3D-202ENST00000444867 EYA1Q99502 592 aa24.2■■□□□ 1.46
SEMA3D-202ENST00000444867 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
SEMA3D-202ENST00000444867 MST1RQ04912 1400 aa24.18■■□□□ 1.46
SEMA3D-202ENST00000444867 IPO8O15397 1037 aaKnown RBP24.18■■□□□ 1.46
SEMA3D-202ENST00000444867 DZIP1LQ8IYY4 767 aaKnown RBP24.18■■□□□ 1.46
SEMA3D-202ENST00000444867 ORAI2Q96SN7 254 aa24.18■■□□□ 1.46
SEMA3D-202ENST00000444867 MBIPQ9NS73 344 aa24.18■■□□□ 1.46
SEMA3D-202ENST00000444867 RLBP1P12271 317 aa24.17■■□□□ 1.46
SEMA3D-202ENST00000444867 MVPQ14764 893 aaKnown RBP24.17■■□□□ 1.46
SEMA3D-202ENST00000444867 GAS2L2Q8NHY3 880 aa24.17■■□□□ 1.46
SEMA3D-202ENST00000444867 IP6K1Q92551 441 aa24.17■■□□□ 1.46
SEMA3D-202ENST00000444867 TMEM94Q12767 1356 aa24.16■■□□□ 1.46
SEMA3D-202ENST00000444867 ATF7IPQ6VMQ6 1270 aa24.16■■□□□ 1.46
SEMA3D-202ENST00000444867 FTSJ3Q8IY81 847 aaKnown RBP24.16■■□□□ 1.46
SEMA3D-202ENST00000444867 FAM83GA6ND36 823 aa24.15■■□□□ 1.46
SEMA3D-202ENST00000444867 VAMP4O75379 141 aa24.15■■□□□ 1.46
SEMA3D-202ENST00000444867 ALS2Q96Q42 1657 aa24.14■■□□□ 1.46
SEMA3D-202ENST00000444867 ZNF335Q9H4Z2 1342 aaPredicted RBP24.14■■□□□ 1.45
SEMA3D-202ENST00000444867 FOXO3O43524 673 aa24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 ATF3P18847 181 aa24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 TNNQ9UQP3 1299 aa24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 TRIM27P14373 513 aa24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 NOB1Q9ULX3 412 aaKnown RBP24.13■■□□□ 1.45
SEMA3D-202ENST00000444867 LRRC37A3O60309 1634 aa24.12■■□□□ 1.45
SEMA3D-202ENST00000444867 USP19O94966 1318 aa24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 CHL1O00533 1208 aa24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 DCTN1Q14203 1278 aa24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 MTHFSDQ2M296 383 aaKnown RBP24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 KRT28Q7Z3Y7 464 aa24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 CRB1P82279 1406 aa24.11■■□□□ 1.45
SEMA3D-202ENST00000444867 KIAA0232Q92628 1395 aa24.1■■□□□ 1.45
SEMA3D-202ENST00000444867 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
SEMA3D-202ENST00000444867 RTF1Q92541 710 aaKnown RBP24.1■■□□□ 1.45
SEMA3D-202ENST00000444867 ARHGAP45Q92619 1136 aa24.1■■□□□ 1.45
SEMA3D-202ENST00000444867 DDX19BQ9UMR2 479 aa24.1■■□□□ 1.45
SEMA3D-202ENST00000444867 MRPL50Q8N5N7 158 aaKnown RBP24.09■■□□□ 1.45
SEMA3D-202ENST00000444867 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms