RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
PIKFYVE-206ENST00000443896 HMOX1P09601 288 aa20.75■□□□□ 0.91
PIKFYVE-206ENST00000443896 EID1Q9Y6B2 187 aa20.75■□□□□ 0.91
PIKFYVE-206ENST00000443896 FTSJ3Q8IY81 847 aaKnown RBP20.74■□□□□ 0.91
PIKFYVE-206ENST00000443896 ARXQ96QS3 562 aa20.74■□□□□ 0.91
PIKFYVE-206ENST00000443896 PLEKHG3A1L390 1219 aa20.73■□□□□ 0.91
PIKFYVE-206ENST00000443896 TRIM27P14373 513 aa20.73■□□□□ 0.91
PIKFYVE-206ENST00000443896 RRS1Q15050 365 aaKnown RBP20.73■□□□□ 0.91
PIKFYVE-206ENST00000443896 ZMYND15Q9H091 742 aa20.72■□□□□ 0.91
PIKFYVE-206ENST00000443896 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
PIKFYVE-206ENST00000443896 SLC26A8Q96RN1 970 aa20.72■□□□□ 0.91
PIKFYVE-206ENST00000443896 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
PIKFYVE-206ENST00000443896 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
PIKFYVE-206ENST00000443896 DDRGK1Q96HY6 314 aa20.71■□□□□ 0.91
PIKFYVE-206ENST00000443896 ACEP12821 1306 aa20.71■□□□□ 0.91
PIKFYVE-206ENST00000443896 ALDH1L2Q3SY69 923 aa20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 OVOS2A0A0J9YW53 1432 aa20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 OVOS2Q6IE36 1432 aa20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 CALD1Q05682 793 aaKnown RBP20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 RWDD1Q9H446 243 aaPredicted RBP20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 TBX22Q9Y458 520 aa20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 VIRMAQ69YN4 1812 aaKnown RBP20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 USP6P35125 1406 aa20.7■□□□□ 0.9
PIKFYVE-206ENST00000443896 PTCH1Q13635 1447 aa20.69■□□□□ 0.9
PIKFYVE-206ENST00000443896 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
PIKFYVE-206ENST00000443896 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
PIKFYVE-206ENST00000443896 NOB1Q9ULX3 412 aaKnown RBP20.69■□□□□ 0.9
PIKFYVE-206ENST00000443896 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
PIKFYVE-206ENST00000443896 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
PIKFYVE-206ENST00000443896 NALCNQ8IZF0 1738 aa20.68■□□□□ 0.9
PIKFYVE-206ENST00000443896 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
PIKFYVE-206ENST00000443896 BRPF1P55201 1214 aaPredicted RBP20.67■□□□□ 0.9
PIKFYVE-206ENST00000443896 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
PIKFYVE-206ENST00000443896 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
PIKFYVE-206ENST00000443896 SSH2Q76I76 1423 aa20.66■□□□□ 0.9
PIKFYVE-206ENST00000443896 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
PIKFYVE-206ENST00000443896 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
PIKFYVE-206ENST00000443896 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
PIKFYVE-206ENST00000443896 LMOD3Q0VAK6 560 aa20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 DLG5Q8TDM6 1919 aa20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 GNAI1P63096 354 aa20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
PIKFYVE-206ENST00000443896 ITPRIPQ8IWB1 547 aa20.64■□□□□ 0.89
PIKFYVE-206ENST00000443896 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.89
PIKFYVE-206ENST00000443896 EIF4A2Q14240 407 aaKnown RBP20.63■□□□□ 0.89
PIKFYVE-206ENST00000443896 TMEM57Q8N5G2 664 aa20.63■□□□□ 0.89
PIKFYVE-206ENST00000443896 VAMP4O75379 141 aa20.62■□□□□ 0.89
PIKFYVE-206ENST00000443896 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
PIKFYVE-206ENST00000443896 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
PIKFYVE-206ENST00000443896 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
PIKFYVE-206ENST00000443896 MBIPQ9NS73 344 aa20.61■□□□□ 0.89
PIKFYVE-206ENST00000443896 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
PIKFYVE-206ENST00000443896 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
PIKFYVE-206ENST00000443896 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
PIKFYVE-206ENST00000443896 ZBTB40Q9NUA8 1239 aa20.6■□□□□ 0.89
PIKFYVE-206ENST00000443896 RGPD1P0DJD0 1748 aa20.59■□□□□ 0.89
PIKFYVE-206ENST00000443896 TSPYL6Q8N831 410 aa20.58■□□□□ 0.89
PIKFYVE-206ENST00000443896 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
PIKFYVE-206ENST00000443896 RIMS1Q86UR5 1692 aaKnown RBP20.58■□□□□ 0.89
PIKFYVE-206ENST00000443896 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.88
PIKFYVE-206ENST00000443896 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.88
PIKFYVE-206ENST00000443896 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.88
PIKFYVE-206ENST00000443896 SULT6B1Q6IMI4 303 aa20.57■□□□□ 0.88
PIKFYVE-206ENST00000443896 AEBP1Q8IUX7 1158 aa20.57■□□□□ 0.88
PIKFYVE-206ENST00000443896 FAM83GA6ND36 823 aa20.56■□□□□ 0.88
PIKFYVE-206ENST00000443896 USP19O94966 1318 aa20.56■□□□□ 0.88
PIKFYVE-206ENST00000443896 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
PIKFYVE-206ENST00000443896 RGPD8O14715 1765 aaPredicted RBP20.55■□□□□ 0.88
PIKFYVE-206ENST00000443896 FRAT2O75474 233 aaPredicted RBP20.55■□□□□ 0.88
PIKFYVE-206ENST00000443896 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
PIKFYVE-206ENST00000443896 GLIPR1L2Q4G1C9 344 aa20.55■□□□□ 0.88
PIKFYVE-206ENST00000443896 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
PIKFYVE-206ENST00000443896 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
PIKFYVE-206ENST00000443896 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
PIKFYVE-206ENST00000443896 ANKARQ7Z5J8 1434 aa20.54■□□□□ 0.88
PIKFYVE-206ENST00000443896 SEC24BO95487 1268 aa20.53■□□□□ 0.88
PIKFYVE-206ENST00000443896 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
PIKFYVE-206ENST00000443896 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
PIKFYVE-206ENST00000443896 NGDNQ8NEJ9 315 aaKnown RBP20.52■□□□□ 0.88
PIKFYVE-206ENST00000443896 NAP1L5Q96NT1 182 aaPredicted RBP20.52■□□□□ 0.88
PIKFYVE-206ENST00000443896 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
PIKFYVE-206ENST00000443896 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.88
PIKFYVE-206ENST00000443896 PIK3C2AO00443 1686 aa20.52■□□□□ 0.87
PIKFYVE-206ENST00000443896 ARHGEF10O15013 1369 aa20.52■□□□□ 0.87
PIKFYVE-206ENST00000443896 ELL2O00472 640 aaPredicted RBP20.51■□□□□ 0.87
PIKFYVE-206ENST00000443896 SBNO1A3KN83 1393 aa20.51■□□□□ 0.87
PIKFYVE-206ENST00000443896 KCNA6P17658 529 aa20.51■□□□□ 0.87
PIKFYVE-206ENST00000443896 ABCC4O15439 1325 aa20.5■□□□□ 0.87
PIKFYVE-206ENST00000443896 FLT4P35916 1363 aa20.5■□□□□ 0.87
PIKFYVE-206ENST00000443896 CHMP4BQ9H444 224 aaKnown RBP20.5■□□□□ 0.87
PIKFYVE-206ENST00000443896 ZBTB7BO15156 539 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-206ENST00000443896 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-206ENST00000443896 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-206ENST00000443896 SOX12O15370 315 aa20.48■□□□□ 0.87
PIKFYVE-206ENST00000443896 CHL1O00533 1208 aa20.47■□□□□ 0.87
PIKFYVE-206ENST00000443896 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
PIKFYVE-206ENST00000443896 KDRP35968 1356 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms