RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 CFAP53Q96M91 514 aa16.77■□□□□ 0.27
LINC02048-201ENST00000440556 TMEM63CQ9P1W3 806 aa16.77■□□□□ 0.27
LINC02048-201ENST00000440556 ABCC11Q96J66 1382 aa16.77■□□□□ 0.27
LINC02048-201ENST00000440556 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
LINC02048-201ENST00000440556 SYCE3A1L190 88 aa16.76■□□□□ 0.27
LINC02048-201ENST00000440556 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
LINC02048-201ENST00000440556 ST18O60284 1047 aa16.75■□□□□ 0.27
LINC02048-201ENST00000440556 SLC20A2Q08357 652 aa16.75■□□□□ 0.27
LINC02048-201ENST00000440556 LNPKQ9C0E8 428 aa16.75■□□□□ 0.27
LINC02048-201ENST00000440556 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
LINC02048-201ENST00000440556 ABCC1P33527 1531 aa16.75■□□□□ 0.27
LINC02048-201ENST00000440556 IL16Q14005 1332 aa16.75■□□□□ 0.27
LINC02048-201ENST00000440556 CCDC66A2RUB6 948 aa16.74■□□□□ 0.27
LINC02048-201ENST00000440556 PLCH2O75038 1416 aa16.74■□□□□ 0.27
LINC02048-201ENST00000440556 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
LINC02048-201ENST00000440556 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
LINC02048-201ENST00000440556 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
LINC02048-201ENST00000440556 CTIFO43310 598 aaKnown RBP16.73■□□□□ 0.27
LINC02048-201ENST00000440556 NOS1P29475 1434 aa16.73■□□□□ 0.27
LINC02048-201ENST00000440556 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
LINC02048-201ENST00000440556 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
LINC02048-201ENST00000440556 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
LINC02048-201ENST00000440556 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
LINC02048-201ENST00000440556 ABCA9Q8IUA7 1624 aa16.72■□□□□ 0.27
LINC02048-201ENST00000440556 ERVK-7P63135 1459 aa16.72■□□□□ 0.27
LINC02048-201ENST00000440556 CD109Q6YHK3 1445 aa16.72■□□□□ 0.27
LINC02048-201ENST00000440556 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
LINC02048-201ENST00000440556 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
LINC02048-201ENST00000440556 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
LINC02048-201ENST00000440556 MYO3AQ8NEV4 1616 aa16.71■□□□□ 0.27
LINC02048-201ENST00000440556 MED14O60244 1454 aa16.71■□□□□ 0.27
LINC02048-201ENST00000440556 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
LINC02048-201ENST00000440556 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
LINC02048-201ENST00000440556 DIP2BQ9P265 1576 aa16.71■□□□□ 0.26
LINC02048-201ENST00000440556 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.26
LINC02048-201ENST00000440556 TRPM2O94759 1503 aa16.7■□□□□ 0.26
LINC02048-201ENST00000440556 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
LINC02048-201ENST00000440556 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
LINC02048-201ENST00000440556 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
LINC02048-201ENST00000440556 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
LINC02048-201ENST00000440556 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
LINC02048-201ENST00000440556 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
LINC02048-201ENST00000440556 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
LINC02048-201ENST00000440556 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
LINC02048-201ENST00000440556 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
LINC02048-201ENST00000440556 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
LINC02048-201ENST00000440556 MCM2P49736 904 aa16.68■□□□□ 0.26
LINC02048-201ENST00000440556 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
LINC02048-201ENST00000440556 TET3O43151 1660 aa16.68■□□□□ 0.26
LINC02048-201ENST00000440556 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
LINC02048-201ENST00000440556 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
LINC02048-201ENST00000440556 MYOM2P54296 1465 aa16.67■□□□□ 0.26
LINC02048-201ENST00000440556 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
LINC02048-201ENST00000440556 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
LINC02048-201ENST00000440556 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
LINC02048-201ENST00000440556 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
LINC02048-201ENST00000440556 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
LINC02048-201ENST00000440556 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
LINC02048-201ENST00000440556 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
LINC02048-201ENST00000440556 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
LINC02048-201ENST00000440556 FANCAO15360 1455 aa16.65■□□□□ 0.26
LINC02048-201ENST00000440556 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
LINC02048-201ENST00000440556 GLI2P10070 1586 aa16.64■□□□□ 0.25
LINC02048-201ENST00000440556 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
LINC02048-201ENST00000440556 U2AF2P26368 475 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC02048-201ENST00000440556 KIAA1524Q8TCG1 905 aa16.64■□□□□ 0.25
LINC02048-201ENST00000440556 TSC1Q92574 1164 aa16.64■□□□□ 0.25
LINC02048-201ENST00000440556 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
LINC02048-201ENST00000440556 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.25
LINC02048-201ENST00000440556 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
LINC02048-201ENST00000440556 NSD2O96028 1365 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 ADCY5O95622 1261 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 BRD1O95696 1058 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 TIGD1Q96MW7 591 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
LINC02048-201ENST00000440556 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 PKP1Q13835 747 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC02048-201ENST00000440556 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 PTPRTO14522 1441 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
LINC02048-201ENST00000440556 REC8O95072 547 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 INTS4Q96HW7 963 aaKnown RBP16.61■□□□□ 0.25
LINC02048-201ENST00000440556 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
LINC02048-201ENST00000440556 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 SLFN14P0C7P3 912 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 VWDEQ8N2E2 1590 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
LINC02048-201ENST00000440556 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
LINC02048-201ENST00000440556 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
LINC02048-201ENST00000440556 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
LINC02048-201ENST00000440556 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
LINC02048-201ENST00000440556 KDM4AO75164 1064 aa16.6■□□□□ 0.25
LINC02048-201ENST00000440556 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms