RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
STRC-203ENST00000440125 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
STRC-203ENST00000440125 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
STRC-203ENST00000440125 SYCE3A1L190 88 aa13.6□□□□□ -0.23
STRC-203ENST00000440125 MAP4K4O95819 1239 aaPredicted RBP13.6□□□□□ -0.23
STRC-203ENST00000440125 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
STRC-203ENST00000440125 A2MP01023 1474 aa13.6□□□□□ -0.23
STRC-203ENST00000440125 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
STRC-203ENST00000440125 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
STRC-203ENST00000440125 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
STRC-203ENST00000440125 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
STRC-203ENST00000440125 NLRP6P59044 892 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 MCM10Q7L590 875 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 IL1RAPL2Q9NP60 686 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 POGZQ7Z3K3 1410 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 FOSBP53539 338 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 NUCB1Q02818 461 aa13.59□□□□□ -0.23
STRC-203ENST00000440125 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
STRC-203ENST00000440125 ZMYM4Q5VZL5 1548 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.24
STRC-203ENST00000440125 C1orf141Q5JVX7 400 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
STRC-203ENST00000440125 NME9Q86XW9 330 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
STRC-203ENST00000440125 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 KDM5BQ9UGL1 1544 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
STRC-203ENST00000440125 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 ZNF518AQ6AHZ1 1483 aa13.58□□□□□ -0.24
STRC-203ENST00000440125 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
STRC-203ENST00000440125 HSP90AB4PQ58FF6 505 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 CNTROBQ8N137 903 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
STRC-203ENST00000440125 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
STRC-203ENST00000440125 TPM4P67936 248 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
STRC-203ENST00000440125 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
STRC-203ENST00000440125 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
STRC-203ENST00000440125 FAM83GA6ND36 823 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 F6X3S4 739 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 SPC24Q8NBT2 197 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
STRC-203ENST00000440125 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
STRC-203ENST00000440125 UQCRHLA0A096LP55 91 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 UQCRHP07919 91 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
STRC-203ENST00000440125 FYB1O15117 783 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
STRC-203ENST00000440125 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
STRC-203ENST00000440125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.55□□□□□ -0.24
STRC-203ENST00000440125 CLCN1P35523 988 aa13.54□□□□□ -0.24
STRC-203ENST00000440125 RRAGDQ9NQL2 400 aaPredicted RBP13.54□□□□□ -0.24
STRC-203ENST00000440125 MBIPQ9NS73 344 aa13.54□□□□□ -0.24
STRC-203ENST00000440125 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
STRC-203ENST00000440125 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
STRC-203ENST00000440125 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
STRC-203ENST00000440125 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
STRC-203ENST00000440125 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
STRC-203ENST00000440125 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 ZBTB40Q9NUA8 1239 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 IL16Q14005 1332 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
STRC-203ENST00000440125 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.24
STRC-203ENST00000440125 TRIM5Q9C035 493 aa13.52□□□□□ -0.24
STRC-203ENST00000440125 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.24
STRC-203ENST00000440125 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.25
STRC-203ENST00000440125 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
STRC-203ENST00000440125 FSD1Q9BTV5 496 aa13.52□□□□□ -0.25
STRC-203ENST00000440125 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
STRC-203ENST00000440125 SRGAP3O43295 1099 aa13.51□□□□□ -0.25
STRC-203ENST00000440125 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
STRC-203ENST00000440125 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
STRC-203ENST00000440125 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
STRC-203ENST00000440125 NSD2O96028 1365 aa13.51□□□□□ -0.25
STRC-203ENST00000440125 MTERF4Q7Z6M4 381 aaKnown RBP13.51□□□□□ -0.25
STRC-203ENST00000440125 CLASP1Q7Z460 1538 aa13.51□□□□□ -0.25
STRC-203ENST00000440125 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
STRC-203ENST00000440125 MX1P20591 662 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 ZNF771Q7L3S4 317 aaPredicted RBP13.5□□□□□ -0.25
STRC-203ENST00000440125 SNX21Q969T3 373 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 KDM5CP41229 1560 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
STRC-203ENST00000440125 TOMM22Q9NS69 142 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
STRC-203ENST00000440125 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
STRC-203ENST00000440125 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms