RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 ZNF830Q96NB3 372 aaPredicted RBP22.26■■□□□ 1.15
KCNC4-204ENST00000438661 TMEM63CQ9P1W3 806 aa22.26■■□□□ 1.15
KCNC4-204ENST00000438661 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
KCNC4-204ENST00000438661 FOXD4L6Q3SYB3 417 aaPredicted RBP22.25■■□□□ 1.15
KCNC4-204ENST00000438661 FOXD4L3Q6VB84 417 aaPredicted RBP22.25■■□□□ 1.15
KCNC4-204ENST00000438661 IQSEC2Q5JU85 1478 aa22.25■■□□□ 1.15
KCNC4-204ENST00000438661 CCDC27Q2M243 656 aa22.25■■□□□ 1.15
KCNC4-204ENST00000438661 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
KCNC4-204ENST00000438661 CLEC17AQ6ZS10 378 aa22.23■■□□□ 1.15
KCNC4-204ENST00000438661 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
KCNC4-204ENST00000438661 ZSCAN20P17040 1043 aaPredicted RBP22.23■■□□□ 1.15
KCNC4-204ENST00000438661 DMTNQ08495 405 aa22.22■■□□□ 1.15
KCNC4-204ENST00000438661 IPO8O15397 1037 aaKnown RBP22.22■■□□□ 1.15
KCNC4-204ENST00000438661 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
KCNC4-204ENST00000438661 LRSAM1Q6UWE0 723 aa22.21■■□□□ 1.15
KCNC4-204ENST00000438661 C17orf53Q8N3J3 647 aaPredicted RBP22.21■■□□□ 1.15
KCNC4-204ENST00000438661 KIAA2012Q0VF49 1180 aa22.21■■□□□ 1.15
KCNC4-204ENST00000438661 IGSF3O75054 1194 aa22.2■■□□□ 1.15
KCNC4-204ENST00000438661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.2■■□□□ 1.15
KCNC4-204ENST00000438661 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.14
KCNC4-204ENST00000438661 ADGRB3O60242 1522 aa22.2■■□□□ 1.14
KCNC4-204ENST00000438661 CDC45O75419 566 aa22.2■■□□□ 1.14
KCNC4-204ENST00000438661 SETBP1Q9Y6X0 1596 aa22.19■■□□□ 1.14
KCNC4-204ENST00000438661 SPDYE4A6NLX3 237 aa22.19■■□□□ 1.14
KCNC4-204ENST00000438661 NPATQ14207 1427 aa22.19■■□□□ 1.14
KCNC4-204ENST00000438661 KIDINS220Q9ULH0 1771 aa22.19■■□□□ 1.14
KCNC4-204ENST00000438661 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
KCNC4-204ENST00000438661 MCM5P33992 734 aa22.18■■□□□ 1.14
KCNC4-204ENST00000438661 FGD1P98174 961 aa22.18■■□□□ 1.14
KCNC4-204ENST00000438661 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
KCNC4-204ENST00000438661 RABEP1Q15276 862 aa22.18■■□□□ 1.14
KCNC4-204ENST00000438661 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
KCNC4-204ENST00000438661 APBB1O00213 710 aa22.17■■□□□ 1.14
KCNC4-204ENST00000438661 PPP4R3BQ5MIZ7 849 aa22.17■■□□□ 1.14
KCNC4-204ENST00000438661 EVC2Q86UK5 1308 aa22.16■■□□□ 1.14
KCNC4-204ENST00000438661 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
KCNC4-204ENST00000438661 CT47B1P0C2W7 299 aaPredicted RBP22.16■■□□□ 1.14
KCNC4-204ENST00000438661 MYRIPQ8NFW9 859 aa22.15■■□□□ 1.14
KCNC4-204ENST00000438661 ZDHHC9Q9Y397 364 aa22.15■■□□□ 1.14
KCNC4-204ENST00000438661 ZNF710Q8N1W2 664 aa22.15■■□□□ 1.14
KCNC4-204ENST00000438661 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
KCNC4-204ENST00000438661 CYP2E1P05181 493 aaPredicted RBP22.14■■□□□ 1.14
KCNC4-204ENST00000438661 GSPT1P15170 499 aaKnown RBP22.14■■□□□ 1.14
KCNC4-204ENST00000438661 NOL8Q76FK4 1167 aaKnown RBP22.14■■□□□ 1.14
KCNC4-204ENST00000438661 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.14
KCNC4-204ENST00000438661 ZC3H13Q5T200 1668 aaKnown RBP22.14■■□□□ 1.13
KCNC4-204ENST00000438661 PLCB2Q00722 1185 aa22.14■■□□□ 1.13
KCNC4-204ENST00000438661 ATP2B3Q16720 1220 aa22.14■■□□□ 1.13
KCNC4-204ENST00000438661 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
KCNC4-204ENST00000438661 GCC1Q96CN9 775 aa22.14■■□□□ 1.13
KCNC4-204ENST00000438661 STK26Q9P289 416 aa22.14■■□□□ 1.13
KCNC4-204ENST00000438661 TTC12Q9H892 705 aaPredicted RBP22.13■■□□□ 1.13
KCNC4-204ENST00000438661 LMTK2Q8IWU2 1503 aa22.13■■□□□ 1.13
KCNC4-204ENST00000438661 ANKRD36BQ8N2N9 1353 aa22.12■■□□□ 1.13
KCNC4-204ENST00000438661 PPLO60437 1756 aa22.12■■□□□ 1.13
KCNC4-204ENST00000438661 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
KCNC4-204ENST00000438661 UTP14CQ5TAP6 766 aaKnown RBP22.12■■□□□ 1.13
KCNC4-204ENST00000438661 ZBTB7BO15156 539 aaPredicted RBP22.11■■□□□ 1.13
KCNC4-204ENST00000438661 SIRT2Q8IXJ6 389 aa22.11■■□□□ 1.13
KCNC4-204ENST00000438661 GDPD2Q9HCC8 539 aa22.11■■□□□ 1.13
KCNC4-204ENST00000438661 ST18O60284 1047 aa22.11■■□□□ 1.13
KCNC4-204ENST00000438661 BBXQ8WY36 941 aaPredicted RBP22.11■■□□□ 1.13
KCNC4-204ENST00000438661 TSPY26PQ9H489 355 aa22.11■■□□□ 1.13
KCNC4-204ENST00000438661 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
KCNC4-204ENST00000438661 USP26Q9BXU7 913 aa22.1■■□□□ 1.13
KCNC4-204ENST00000438661 SRPK2P78362 688 aaKnown RBP22.09■■□□□ 1.13
KCNC4-204ENST00000438661 NOLC1Q14978 699 aaKnown RBP eCLIP22.09■■□□□ 1.13
KCNC4-204ENST00000438661 PLEKHF1Q96S99 279 aa22.09■■□□□ 1.13
KCNC4-204ENST00000438661 CWC22Q9HCG8 908 aaKnown RBP22.09■■□□□ 1.13
KCNC4-204ENST00000438661 TULP4Q9NRJ4 1543 aa22.09■■□□□ 1.13
KCNC4-204ENST00000438661 USP25Q9UHP3 1055 aa22.08■■□□□ 1.13
KCNC4-204ENST00000438661 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
KCNC4-204ENST00000438661 VGFO15240 615 aaPredicted RBP22.08■■□□□ 1.12
KCNC4-204ENST00000438661 ATAD2Q6PL18 1390 aa22.07■■□□□ 1.12
KCNC4-204ENST00000438661 KIF3AQ9Y496 699 aa22.07■■□□□ 1.12
KCNC4-204ENST00000438661 OTUD7AQ8TE49 926 aaPredicted RBP22.07■■□□□ 1.12
KCNC4-204ENST00000438661 USP32Q8NFA0 1604 aa22.07■■□□□ 1.12
KCNC4-204ENST00000438661 PLEKHM2Q8IWE5 1019 aa22.06■■□□□ 1.12
KCNC4-204ENST00000438661 A0A1W2PP64 1363 aa22.06■■□□□ 1.12
KCNC4-204ENST00000438661 GLI2P10070 1586 aa22.06■■□□□ 1.12
KCNC4-204ENST00000438661 THUMPD2Q9BTF0 503 aaKnown RBP22.05■■□□□ 1.12
KCNC4-204ENST00000438661 NSD2O96028 1365 aa22.05■■□□□ 1.12
KCNC4-204ENST00000438661 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
KCNC4-204ENST00000438661 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
KCNC4-204ENST00000438661 HMGN5P82970 282 aaKnown RBP22.03■■□□□ 1.12
KCNC4-204ENST00000438661 BCL2L12Q9HB09 334 aa22.03■■□□□ 1.12
KCNC4-204ENST00000438661 MBD3O95983 291 aa22.03■■□□□ 1.12
KCNC4-204ENST00000438661 NEK4P51957 841 aa22.03■■□□□ 1.12
KCNC4-204ENST00000438661 PRIMPOLQ96LW4 560 aa22.03■■□□□ 1.12
KCNC4-204ENST00000438661 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.12
KCNC4-204ENST00000438661 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 FRMPD1Q5SYB0 1578 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
KCNC4-204ENST00000438661 ADGRB2O60241 1585 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 FYB1O15117 783 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 U2AF2P26368 475 aaKnown RBP eCLIP22.02■■□□□ 1.12
KCNC4-204ENST00000438661 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 PIBF1Q8WXW3 757 aa22.02■■□□□ 1.12
KCNC4-204ENST00000438661 SMARCA5O60264 1052 aaPredicted RBP22.02■■□□□ 1.11
KCNC4-204ENST00000438661 GADD45BO75293 160 aaPredicted RBP22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms