RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 PPIP5K1Q6PFW1 1433 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 BTBD11A6QL63 1104 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 ADAMTS2O95450 1211 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 ARHGEF5Q12774 1597 aa9.96□□□□□ -0.81
TMEM39A-202ENST00000438581 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 YTHDC2Q9H6S0 1430 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-202ENST00000438581 RARSP54136 660 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 TSPOAP1O95153 1857 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 GNAI3P08754 354 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 HSP90AA2PQ14568 343 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 POLKQ9UBT6 870 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 TMEM57Q8N5G2 664 aa9.95□□□□□ -0.82
TMEM39A-202ENST00000438581 LTKP29376 864 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 ZRSR1Q15695 479 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 TBX22Q9Y458 520 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 PARD3Q8TEW0 1356 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 GOLGA6L4A6NEF3 574 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 DIAPH3Q9NSV4 1193 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 GCC2Q8IWJ2 1684 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 NSD2O96028 1365 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 CT47B1P0C2W7 299 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 NEUROD6Q96NK8 337 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 TOMM22Q9NS69 142 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 ASXL1Q8IXJ9 1541 aa9.94□□□□□ -0.82
TMEM39A-202ENST00000438581 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 CABLES1Q8TDN4 633 aa9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 A0A1W2PP64 1363 aa9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 TMX4Q9H1E5 349 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 PHF14O94880 888 aa9.93□□□□□ -0.82
TMEM39A-202ENST00000438581 TAF3Q5VWG9 929 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 SRCIN1Q9C0H9 1055 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 ADGBQ8N7X0 1667 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 GNAI2P04899 355 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 ABCC1P33527 1531 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 G3V3G9 751 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 EIF2AK4Q9P2K8 1649 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-202ENST00000438581 F6X3S4 739 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 UGGT1Q9NYU2 1555 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 HMGB1P1B2RPK0 211 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 ST18O60284 1047 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 HSP90AB4PQ58FF6 505 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 PREX2Q70Z35 1606 aa9.91□□□□□ -0.82
TMEM39A-202ENST00000438581 CLASRPQ8N2M8 674 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 COL17A1Q9UMD9 1497 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 LRPPRCP42704 1394 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 SIL1Q9H173 461 aa9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 C19orf44Q9H6X5 657 aa9.9□□□□□ -0.82
TMEM39A-202ENST00000438581 REC8O95072 547 aa9.9□□□□□ -0.83
TMEM39A-202ENST00000438581 FOXD4L6Q3SYB3 417 aaPredicted RBP9.9□□□□□ -0.83
TMEM39A-202ENST00000438581 FOXD4L3Q6VB84 417 aaPredicted RBP9.9□□□□□ -0.83
TMEM39A-202ENST00000438581 ABCC11Q96J66 1382 aa9.9□□□□□ -0.83
TMEM39A-202ENST00000438581 LRRC59Q96AG4 307 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 GNL2Q13823 731 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 CDC42BPAQ5VT25 1732 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 GBP4Q96PP9 640 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 MSH6P52701 1360 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 ANXA1P04083 346 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 AMOTQ4VCS5 1084 aa9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-202ENST00000438581 MLH3Q9UHC1 1453 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 TMEM2Q9UHN6 1383 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 TRIM27P14373 513 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 RUFY2Q8WXA3 655 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 SRGAP3O43295 1099 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 CHRM1P11229 460 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms