RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 ALDH1L2Q3SY69 923 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 SSH1Q8WYL5 1049 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 KIF16BQ96L93 1317 aa21.41■■□□□ 1.02
LIMK1-203ENST00000435201 DLG5Q8TDM6 1919 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 USP31Q70CQ4 1352 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 PIK3R4Q99570 1358 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 RGS3P49796 1198 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 TTC21AQ8NDW8 1320 aa21.4■■□□□ 1.02
LIMK1-203ENST00000435201 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.02
LIMK1-203ENST00000435201 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
LIMK1-203ENST00000435201 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
LIMK1-203ENST00000435201 GNAI1P63096 354 aa21.38■■□□□ 1.01
LIMK1-203ENST00000435201 ATF7IPQ6VMQ6 1270 aa21.38■■□□□ 1.01
LIMK1-203ENST00000435201 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
LIMK1-203ENST00000435201 TRIM27P14373 513 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 RWDD1Q9H446 243 aaPredicted RBP21.37■■□□□ 1.01
LIMK1-203ENST00000435201 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 ANKARQ7Z5J8 1434 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
LIMK1-203ENST00000435201 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
LIMK1-203ENST00000435201 PEAK1Q9H792 1746 aa21.36■■□□□ 1.01
LIMK1-203ENST00000435201 BRPF1P55201 1214 aaPredicted RBP21.35■■□□□ 1.01
LIMK1-203ENST00000435201 RGPD1P0DJD0 1748 aa21.35■■□□□ 1.01
LIMK1-203ENST00000435201 RGPD8O14715 1765 aaPredicted RBP21.35■■□□□ 1.01
LIMK1-203ENST00000435201 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
LIMK1-203ENST00000435201 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
LIMK1-203ENST00000435201 FMN2Q9NZ56 1722 aa21.34■■□□□ 1.01
LIMK1-203ENST00000435201 ZNF853P0CG23 659 aa21.34■■□□□ 1.01
LIMK1-203ENST00000435201 EIF4A2Q14240 407 aaKnown RBP21.34■■□□□ 1.01
LIMK1-203ENST00000435201 ZNF142P52746 1687 aaPredicted RBP21.34■■□□□ 1.01
LIMK1-203ENST00000435201 LAS1LQ9Y4W2 734 aaKnown RBP21.33■■□□□ 1.01
LIMK1-203ENST00000435201 ITPRIPQ8IWB1 547 aa21.3■■□□□ 1
LIMK1-203ENST00000435201 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
LIMK1-203ENST00000435201 CFAP44Q96MT7 982 aa21.3■■□□□ 1
LIMK1-203ENST00000435201 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
LIMK1-203ENST00000435201 PIK3C2AO00443 1686 aa21.29■■□□□ 1
LIMK1-203ENST00000435201 USP54Q70EL1 1684 aa21.28■■□□□ 1
LIMK1-203ENST00000435201 VAMP4O75379 141 aa21.28■■□□□ 1
LIMK1-203ENST00000435201 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
LIMK1-203ENST00000435201 MBIPQ9NS73 344 aa21.28■■□□□ 1
LIMK1-203ENST00000435201 ARHGEF10O15013 1369 aa21.28■■□□□ 1
LIMK1-203ENST00000435201 SBNO1A3KN83 1393 aa21.27■■□□□ 1
LIMK1-203ENST00000435201 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
LIMK1-203ENST00000435201 KCNA6P17658 529 aa21.27■■□□□ 1
LIMK1-203ENST00000435201 HDAC1Q13547 482 aaPredicted RBP21.27■■□□□ 1
LIMK1-203ENST00000435201 TMEM57Q8N5G2 664 aa21.27■■□□□ 1
LIMK1-203ENST00000435201 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
LIMK1-203ENST00000435201 FLT4P35916 1363 aa21.27■■□□□ 1
LIMK1-203ENST00000435201 HSP90AB2PQ58FF8 381 aa21.26■□□□□ 0.99
LIMK1-203ENST00000435201 AEBP1Q8IUX7 1158 aa21.26■□□□□ 0.99
LIMK1-203ENST00000435201 PDZRN3Q9UPQ7 1066 aa21.26■□□□□ 0.99
LIMK1-203ENST00000435201 MRPL50Q8N5N7 158 aaKnown RBP21.25■□□□□ 0.99
LIMK1-203ENST00000435201 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
LIMK1-203ENST00000435201 ADAMTSL3P82987 1691 aa21.24■□□□□ 0.99
LIMK1-203ENST00000435201 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
LIMK1-203ENST00000435201 ANKLE2Q86XL3 938 aa21.24■□□□□ 0.99
LIMK1-203ENST00000435201 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
LIMK1-203ENST00000435201 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
LIMK1-203ENST00000435201 KIF24Q5T7B8 1368 aa21.22■□□□□ 0.99
LIMK1-203ENST00000435201 FAM83GA6ND36 823 aa21.22■□□□□ 0.99
LIMK1-203ENST00000435201 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
LIMK1-203ENST00000435201 HAP1P54257 671 aaPredicted RBP21.22■□□□□ 0.99
LIMK1-203ENST00000435201 MARF1Q9Y4F3 1742 aaKnown RBP21.22■□□□□ 0.99
LIMK1-203ENST00000435201 KDRP35968 1356 aa21.2■□□□□ 0.98
LIMK1-203ENST00000435201 SOX12O15370 315 aa21.2■□□□□ 0.98
LIMK1-203ENST00000435201 DCTN1Q14203 1278 aa21.19■□□□□ 0.98
LIMK1-203ENST00000435201 SETD1BQ9UPS6 1966 aaKnown RBP21.19■□□□□ 0.98
LIMK1-203ENST00000435201 C8orf58Q8NAV2 365 aa21.18■□□□□ 0.98
LIMK1-203ENST00000435201 AMPHP49418 695 aa21.18■□□□□ 0.98
LIMK1-203ENST00000435201 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
LIMK1-203ENST00000435201 ABCC4O15439 1325 aa21.17■□□□□ 0.98
LIMK1-203ENST00000435201 NLRP6P59044 892 aa21.17■□□□□ 0.98
LIMK1-203ENST00000435201 API5Q9BZZ5 524 aaKnown RBP21.17■□□□□ 0.98
LIMK1-203ENST00000435201 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
LIMK1-203ENST00000435201 CHL1O00533 1208 aa21.16■□□□□ 0.98
LIMK1-203ENST00000435201 IGSF1Q8N6C5 1336 aa21.16■□□□□ 0.98
LIMK1-203ENST00000435201 ELL2O00472 640 aaPredicted RBP21.15■□□□□ 0.98
LIMK1-203ENST00000435201 DAXXQ9UER7 740 aaPredicted RBP21.14■□□□□ 0.97
LIMK1-203ENST00000435201 CRB1P82279 1406 aa21.14■□□□□ 0.97
LIMK1-203ENST00000435201 ADGRL3Q9HAR2 1447 aa21.14■□□□□ 0.97
LIMK1-203ENST00000435201 ZBTB7BO15156 539 aaPredicted RBP21.13■□□□□ 0.97
LIMK1-203ENST00000435201 MCM10Q7L590 875 aa21.13■□□□□ 0.97
LIMK1-203ENST00000435201 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
LIMK1-203ENST00000435201 GAS2L2Q8NHY3 880 aa21.12■□□□□ 0.97
LIMK1-203ENST00000435201 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
LIMK1-203ENST00000435201 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
LIMK1-203ENST00000435201 EYA1Q99502 592 aa21.11■□□□□ 0.97
LIMK1-203ENST00000435201 USP19O94966 1318 aa21.11■□□□□ 0.97
LIMK1-203ENST00000435201 HOXC9P31274 260 aa21.11■□□□□ 0.97
LIMK1-203ENST00000435201 RTF1Q92541 710 aaKnown RBP21.11■□□□□ 0.97
LIMK1-203ENST00000435201 NBR1Q14596 966 aa21.1■□□□□ 0.97
LIMK1-203ENST00000435201 MTHFSDQ2M296 383 aaKnown RBP21.1■□□□□ 0.97
LIMK1-203ENST00000435201 UPF2Q9HAU5 1272 aaKnown RBP21.1■□□□□ 0.97
LIMK1-203ENST00000435201 NPHP4O75161 1426 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms