RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 FBXO31Q5XUX0 539 aaPredicted RBP15.31■□□□□ 0.04
CPNE4-201ENST00000429747 ANKRD36BQ8N2N9 1353 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
CPNE4-201ENST00000429747 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
CPNE4-201ENST00000429747 NLRP6P59044 892 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 UPF3BQ9BZI7 483 aaKnown RBP15.31■□□□□ 0.04
CPNE4-201ENST00000429747 LRRCC1Q9C099 1032 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 IL1RAPL2Q9NP60 686 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 SYCE3A1L190 88 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
CPNE4-201ENST00000429747 MCM2P49736 904 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 ABCC10Q5T3U5 1492 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.3■□□□□ 0.04
CPNE4-201ENST00000429747 F6X3S4 739 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 FIBPO43427 364 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
CPNE4-201ENST00000429747 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
CPNE4-201ENST00000429747 TSPY26PQ9H489 355 aa15.3■□□□□ 0.04
CPNE4-201ENST00000429747 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
CPNE4-201ENST00000429747 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
CPNE4-201ENST00000429747 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
CPNE4-201ENST00000429747 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
CPNE4-201ENST00000429747 H3BQV1 296 aa15.28■□□□□ 0.04
CPNE4-201ENST00000429747 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
CPNE4-201ENST00000429747 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.03
CPNE4-201ENST00000429747 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.03
CPNE4-201ENST00000429747 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.03
CPNE4-201ENST00000429747 CLCN1P35523 988 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 PLA2R1Q13018 1463 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
CPNE4-201ENST00000429747 SNX21Q969T3 373 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 PHACTR3Q96KR7 559 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 FAM184AQ8NB25 1140 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
CPNE4-201ENST00000429747 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
CPNE4-201ENST00000429747 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 RBM27Q9P2N5 1060 aaKnown RBP15.25■□□□□ 0.03
CPNE4-201ENST00000429747 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
CPNE4-201ENST00000429747 VAMP4O75379 141 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
CPNE4-201ENST00000429747 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
CPNE4-201ENST00000429747 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.25■□□□□ 0.03
CPNE4-201ENST00000429747 GNL2Q13823 731 aaKnown RBP15.24■□□□□ 0.03
CPNE4-201ENST00000429747 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
CPNE4-201ENST00000429747 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
CPNE4-201ENST00000429747 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPNE4-201ENST00000429747 HSP90AB4PQ58FF6 505 aa15.24■□□□□ 0.03
CPNE4-201ENST00000429747 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
CPNE4-201ENST00000429747 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
CPNE4-201ENST00000429747 GOLGA6L19H0YKK7 550 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 XPCQ01831 940 aaPredicted RBP15.23■□□□□ 0.03
CPNE4-201ENST00000429747 SDSP20132 328 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 NUTM1Q86Y26 1132 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 ZNF592Q92610 1267 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
CPNE4-201ENST00000429747 BECN2A8MW95 431 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 FOSBP53539 338 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 MEIS3Q99687 375 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 A0A1W2PP64 1363 aa15.23■□□□□ 0.03
CPNE4-201ENST00000429747 MAST1Q9Y2H9 1570 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 BCL11BQ9C0K0 894 aaPredicted RBP15.22■□□□□ 0.03
CPNE4-201ENST00000429747 PTPRTO14522 1441 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 MX1P20591 662 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 SF3A1Q15459 793 aaKnown RBP15.22■□□□□ 0.03
CPNE4-201ENST00000429747 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
CPNE4-201ENST00000429747 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
CPNE4-201ENST00000429747 UQCRHLA0A096LP55 91 aa15.21■□□□□ 0.03
CPNE4-201ENST00000429747 SRGAP3O43295 1099 aa15.21■□□□□ 0.03
CPNE4-201ENST00000429747 UQCRHP07919 91 aa15.21■□□□□ 0.03
CPNE4-201ENST00000429747 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
CPNE4-201ENST00000429747 ZBTB7BO15156 539 aaPredicted RBP15.21■□□□□ 0.02
CPNE4-201ENST00000429747 SPC24Q8NBT2 197 aa15.21■□□□□ 0.02
CPNE4-201ENST00000429747 WASLO00401 505 aaPredicted RBP15.2■□□□□ 0.02
CPNE4-201ENST00000429747 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
CPNE4-201ENST00000429747 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
CPNE4-201ENST00000429747 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
CPNE4-201ENST00000429747 ARHGEF5Q12774 1597 aa15.2■□□□□ 0.02
CPNE4-201ENST00000429747 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
CPNE4-201ENST00000429747 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
CPNE4-201ENST00000429747 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
CPNE4-201ENST00000429747 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
CPNE4-201ENST00000429747 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
CPNE4-201ENST00000429747 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms