RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
SNX13-203ENST00000428135 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
SNX13-203ENST00000428135 TNRQ92752 1358 aa11.74□□□□□ -0.53
SNX13-203ENST00000428135 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
SNX13-203ENST00000428135 NME9Q86XW9 330 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 GNAI2P04899 355 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 FBLN1P23142 703 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 GNAI3P08754 354 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
SNX13-203ENST00000428135 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
SNX13-203ENST00000428135 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 IL1RAPL2Q9NP60 686 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 ABCC5O15440 1437 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
SNX13-203ENST00000428135 TPM1P09493 284 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
SNX13-203ENST00000428135 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
SNX13-203ENST00000428135 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.53
SNX13-203ENST00000428135 CDC45O75419 566 aa11.71□□□□□ -0.53
SNX13-203ENST00000428135 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.53
SNX13-203ENST00000428135 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 NAP1L1P55209 391 aaKnown RBP11.7□□□□□ -0.54
SNX13-203ENST00000428135 HFM1A2PYH4 1435 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
SNX13-203ENST00000428135 NEK4P51957 841 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 NUP133Q8WUM0 1156 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 SRCIN1Q9C0H9 1055 aa11.7□□□□□ -0.54
SNX13-203ENST00000428135 AACSQ86V21 672 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
SNX13-203ENST00000428135 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 GOLGA6L1Q8N7Z2 621 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 NOS1P29475 1434 aa11.69□□□□□ -0.54
SNX13-203ENST00000428135 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
SNX13-203ENST00000428135 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
SNX13-203ENST00000428135 ABCF2Q9UG63 623 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 MSH6P52701 1360 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 ZFYVE27Q5T4F4 411 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 TRAPPC8Q9Y2L5 1435 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
SNX13-203ENST00000428135 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
SNX13-203ENST00000428135 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
SNX13-203ENST00000428135 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 PDILTQ8N807 584 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 GNAT3A8MTJ3 354 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 ANKRD20A12PQ8NF67 263 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
SNX13-203ENST00000428135 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 ZHX3Q9H4I2 956 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 R3HCC1Q9Y3T6 440 aaKnown RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 EPS15P42566 896 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 LRRCC1Q9C099 1032 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 SDF4Q9BRK5 362 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 WASLO00401 505 aaPredicted RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 GPTP24298 496 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 PSMA5P28066 241 aa11.66□□□□□ -0.54
SNX13-203ENST00000428135 CWC27Q6UX04 472 aaKnown RBP11.66□□□□□ -0.54
SNX13-203ENST00000428135 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 XBP1P17861 261 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 MYD88Q99836 296 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 CHMP5Q9NZZ3 219 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 LRP2BPQ9P2M1 347 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
SNX13-203ENST00000428135 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 EXOC6BQ9Y2D4 811 aa11.65□□□□□ -0.54
SNX13-203ENST00000428135 ZPR1O75312 459 aa11.65□□□□□ -0.55
SNX13-203ENST00000428135 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.55
SNX13-203ENST00000428135 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 PLCH2O75038 1416 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 SMARCA5O60264 1052 aaPredicted RBP11.64□□□□□ -0.55
SNX13-203ENST00000428135 FAM135AQ9P2D6 1515 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 F6X3S4 739 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 TDO2P48775 406 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms