RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 TRIM27P14373 513 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 ALDH1L2Q3SY69 923 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 ATF7IPQ6VMQ6 1270 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
SNX17-202ENST00000427123 TTC21BQ7Z4L5 1316 aa24.6■■□□□ 1.53
SNX17-202ENST00000427123 RRS1Q15050 365 aaKnown RBP24.6■■□□□ 1.53
SNX17-202ENST00000427123 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
SNX17-202ENST00000427123 ACEP12821 1306 aa24.59■■□□□ 1.53
SNX17-202ENST00000427123 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
SNX17-202ENST00000427123 LMOD3Q0VAK6 560 aa24.58■■□□□ 1.53
SNX17-202ENST00000427123 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
SNX17-202ENST00000427123 TBX22Q9Y458 520 aa24.58■■□□□ 1.53
SNX17-202ENST00000427123 DDX19BQ9UMR2 479 aa24.57■■□□□ 1.52
SNX17-202ENST00000427123 IPO8O15397 1037 aaKnown RBP24.57■■□□□ 1.52
SNX17-202ENST00000427123 NOB1Q9ULX3 412 aaKnown RBP24.57■■□□□ 1.52
SNX17-202ENST00000427123 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
SNX17-202ENST00000427123 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SNX17-202ENST00000427123 GNAI1P63096 354 aa24.55■■□□□ 1.52
SNX17-202ENST00000427123 BRPF1P55201 1214 aaPredicted RBP24.54■■□□□ 1.52
SNX17-202ENST00000427123 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
SNX17-202ENST00000427123 SSH2Q76I76 1423 aa24.54■■□□□ 1.52
SNX17-202ENST00000427123 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
SNX17-202ENST00000427123 PEAK1Q9H792 1746 aa24.53■■□□□ 1.52
SNX17-202ENST00000427123 ITPRIPQ8IWB1 547 aa24.53■■□□□ 1.52
SNX17-202ENST00000427123 USP31Q70CQ4 1352 aa24.53■■□□□ 1.52
SNX17-202ENST00000427123 RGPD1P0DJD0 1748 aa24.53■■□□□ 1.52
SNX17-202ENST00000427123 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
SNX17-202ENST00000427123 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
SNX17-202ENST00000427123 PDZRN3Q9UPQ7 1066 aa24.52■■□□□ 1.52
SNX17-202ENST00000427123 FMN2Q9NZ56 1722 aa24.51■■□□□ 1.51
SNX17-202ENST00000427123 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
SNX17-202ENST00000427123 TTC21AQ8NDW8 1320 aa24.5■■□□□ 1.51
SNX17-202ENST00000427123 HDAC1Q13547 482 aaPredicted RBP24.5■■□□□ 1.51
SNX17-202ENST00000427123 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
SNX17-202ENST00000427123 NBR1Q14596 966 aa24.49■■□□□ 1.51
SNX17-202ENST00000427123 TMEM57Q8N5G2 664 aa24.49■■□□□ 1.51
SNX17-202ENST00000427123 EIF4A2Q14240 407 aaKnown RBP24.49■■□□□ 1.51
SNX17-202ENST00000427123 RGPD8O14715 1765 aaPredicted RBP24.49■■□□□ 1.51
SNX17-202ENST00000427123 CEP170BQ9Y4F5 1589 aaPredicted RBP24.48■■□□□ 1.51
SNX17-202ENST00000427123 MBIPQ9NS73 344 aa24.47■■□□□ 1.51
SNX17-202ENST00000427123 VAMP4O75379 141 aa24.47■■□□□ 1.51
SNX17-202ENST00000427123 CFAP44Q96MT7 982 aa24.47■■□□□ 1.51
SNX17-202ENST00000427123 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
SNX17-202ENST00000427123 ANKARQ7Z5J8 1434 aa24.45■■□□□ 1.5
SNX17-202ENST00000427123 ZBTB40Q9NUA8 1239 aa24.45■■□□□ 1.5
SNX17-202ENST00000427123 PIK3R4Q99570 1358 aa24.45■■□□□ 1.5
SNX17-202ENST00000427123 MRPL50Q8N5N7 158 aaKnown RBP24.44■■□□□ 1.5
SNX17-202ENST00000427123 ARHGAP45Q92619 1136 aa24.44■■□□□ 1.5
SNX17-202ENST00000427123 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
SNX17-202ENST00000427123 SULT6B1Q6IMI4 303 aa24.42■■□□□ 1.5
SNX17-202ENST00000427123 AEBP1Q8IUX7 1158 aa24.42■■□□□ 1.5
SNX17-202ENST00000427123 DAXXQ9UER7 740 aaPredicted RBP24.42■■□□□ 1.5
SNX17-202ENST00000427123 ARHGEF10O15013 1369 aa24.42■■□□□ 1.5
SNX17-202ENST00000427123 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
SNX17-202ENST00000427123 TSPYL6Q8N831 410 aa24.41■■□□□ 1.5
SNX17-202ENST00000427123 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
SNX17-202ENST00000427123 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
SNX17-202ENST00000427123 CHMP4BQ9H444 224 aaKnown RBP24.4■■□□□ 1.5
SNX17-202ENST00000427123 USP19O94966 1318 aa24.4■■□□□ 1.5
SNX17-202ENST00000427123 SBNO1A3KN83 1393 aa24.39■■□□□ 1.5
SNX17-202ENST00000427123 FAM83GA6ND36 823 aa24.39■■□□□ 1.5
SNX17-202ENST00000427123 SMC5Q8IY18 1101 aa24.39■■□□□ 1.5
SNX17-202ENST00000427123 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.5
SNX17-202ENST00000427123 HSP90AB2PQ58FF8 381 aa24.39■■□□□ 1.49
SNX17-202ENST00000427123 FLT4P35916 1363 aa24.38■■□□□ 1.49
SNX17-202ENST00000427123 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
SNX17-202ENST00000427123 ABCC4O15439 1325 aa24.37■■□□□ 1.49
SNX17-202ENST00000427123 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
SNX17-202ENST00000427123 C8orf58Q8NAV2 365 aa24.36■■□□□ 1.49
SNX17-202ENST00000427123 DCTN1Q14203 1278 aa24.35■■□□□ 1.49
SNX17-202ENST00000427123 MARF1Q9Y4F3 1742 aaKnown RBP24.35■■□□□ 1.49
SNX17-202ENST00000427123 SEC24BO95487 1268 aa24.34■■□□□ 1.49
SNX17-202ENST00000427123 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
SNX17-202ENST00000427123 KCNA6P17658 529 aa24.34■■□□□ 1.49
SNX17-202ENST00000427123 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.49
SNX17-202ENST00000427123 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
SNX17-202ENST00000427123 API5Q9BZZ5 524 aaKnown RBP24.33■■□□□ 1.49
SNX17-202ENST00000427123 UPF2Q9HAU5 1272 aaKnown RBP24.33■■□□□ 1.49
SNX17-202ENST00000427123 USP35Q9P2H5 1018 aa24.33■■□□□ 1.49
SNX17-202ENST00000427123 SOX12O15370 315 aa24.32■■□□□ 1.48
SNX17-202ENST00000427123 TRHP20396 242 aaPredicted RBP24.32■■□□□ 1.48
SNX17-202ENST00000427123 KDRP35968 1356 aa24.32■■□□□ 1.48
SNX17-202ENST00000427123 ZBTB7BO15156 539 aaPredicted RBP24.32■■□□□ 1.48
SNX17-202ENST00000427123 KIAA0232Q92628 1395 aa24.31■■□□□ 1.48
SNX17-202ENST00000427123 SLC4A3P48751 1232 aa24.3■■□□□ 1.48
SNX17-202ENST00000427123 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
SNX17-202ENST00000427123 CHL1O00533 1208 aa24.3■■□□□ 1.48
SNX17-202ENST00000427123 CRB1P82279 1406 aa24.29■■□□□ 1.48
SNX17-202ENST00000427123 NUCB1Q02818 461 aa24.28■■□□□ 1.48
SNX17-202ENST00000427123 AMPHP49418 695 aa24.28■■□□□ 1.48
SNX17-202ENST00000427123 IGSF1Q8N6C5 1336 aa24.28■■□□□ 1.48
SNX17-202ENST00000427123 MCM10Q7L590 875 aa24.27■■□□□ 1.48
SNX17-202ENST00000427123 DEKP35659 375 aaKnown RBP24.26■■□□□ 1.47
SNX17-202ENST00000427123 TBC1D32Q96NH3 1257 aa24.26■■□□□ 1.47
SNX17-202ENST00000427123 NLRP6P59044 892 aa24.25■■□□□ 1.47
SNX17-202ENST00000427123 GCC1Q96CN9 775 aa24.25■■□□□ 1.47
SNX17-202ENST00000427123 LRRC37A3O60309 1634 aa24.25■■□□□ 1.47
SNX17-202ENST00000427123 BECN1Q14457 450 aa24.23■■□□□ 1.47
SNX17-202ENST00000427123 ANKLE2Q86XL3 938 aa24.23■■□□□ 1.47
SNX17-202ENST00000427123 ADAMTSL3P82987 1691 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms