RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 NLRP6P59044 892 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 ZKSCAN2Q63HK3 967 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 MCM10Q7L590 875 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
SNCA-206ENST00000420646 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
SNCA-206ENST00000420646 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
SNCA-206ENST00000420646 SLIT1O75093 1534 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 ANP32AP39687 249 aaKnown RBP11.29□□□□□ -0.6
SNCA-206ENST00000420646 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
SNCA-206ENST00000420646 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
SNCA-206ENST00000420646 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SNCA-206ENST00000420646 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 ANKLE2Q86XL3 938 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 C8orf58Q8NAV2 365 aa11.29□□□□□ -0.6
SNCA-206ENST00000420646 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
SNCA-206ENST00000420646 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
SNCA-206ENST00000420646 MVPQ14764 893 aaKnown RBP11.28□□□□□ -0.6
SNCA-206ENST00000420646 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
SNCA-206ENST00000420646 MS4A1P11836 297 aa11.27□□□□□ -0.6
SNCA-206ENST00000420646 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.6
SNCA-206ENST00000420646 ABTB2Q8N961 1025 aa11.27□□□□□ -0.6
SNCA-206ENST00000420646 AMPHP49418 695 aa11.27□□□□□ -0.61
SNCA-206ENST00000420646 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.61
SNCA-206ENST00000420646 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
SNCA-206ENST00000420646 VAMP4O75379 141 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
SNCA-206ENST00000420646 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
SNCA-206ENST00000420646 SLC4A3P48751 1232 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
SNCA-206ENST00000420646 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
SNCA-206ENST00000420646 IL16Q14005 1332 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
SNCA-206ENST00000420646 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 AKAP12Q02952 1782 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 DIP2AQ14689 1571 aa11.25□□□□□ -0.61
SNCA-206ENST00000420646 EYA1Q99502 592 aa11.24□□□□□ -0.61
SNCA-206ENST00000420646 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
SNCA-206ENST00000420646 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
SNCA-206ENST00000420646 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
SNCA-206ENST00000420646 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
SNCA-206ENST00000420646 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
SNCA-206ENST00000420646 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 SEC24BO95487 1268 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 GNAI1P63096 354 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 NBR1Q14596 966 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
SNCA-206ENST00000420646 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
SNCA-206ENST00000420646 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
SNCA-206ENST00000420646 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
SNCA-206ENST00000420646 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
SNCA-206ENST00000420646 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
SNCA-206ENST00000420646 CT47B1P0C2W7 299 aaPredicted RBP11.22□□□□□ -0.61
SNCA-206ENST00000420646 USP31Q70CQ4 1352 aa11.21□□□□□ -0.61
SNCA-206ENST00000420646 MRPL50Q8N5N7 158 aaKnown RBP11.21□□□□□ -0.61
SNCA-206ENST00000420646 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.62
SNCA-206ENST00000420646 PSME1Q06323 249 aa11.21□□□□□ -0.62
SNCA-206ENST00000420646 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 HOXC9P31274 260 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
SNCA-206ENST00000420646 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
SNCA-206ENST00000420646 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
SNCA-206ENST00000420646 KIF16BQ96L93 1317 aa11.19□□□□□ -0.62
SNCA-206ENST00000420646 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
SNCA-206ENST00000420646 IPO8O15397 1037 aaKnown RBP11.19□□□□□ -0.62
SNCA-206ENST00000420646 ALDH1L2Q3SY69 923 aa11.19□□□□□ -0.62
SNCA-206ENST00000420646 FLT4P35916 1363 aa11.19□□□□□ -0.62
SNCA-206ENST00000420646 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
SNCA-206ENST00000420646 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
SNCA-206ENST00000420646 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
SNCA-206ENST00000420646 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
SNCA-206ENST00000420646 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
SNCA-206ENST00000420646 PIK3C2AO00443 1686 aa11.17□□□□□ -0.62
SNCA-206ENST00000420646 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
SNCA-206ENST00000420646 CHL1O00533 1208 aa11.17□□□□□ -0.62
SNCA-206ENST00000420646 PROSER2Q86WR7 435 aaPredicted RBP11.17□□□□□ -0.62
SNCA-206ENST00000420646 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
SNCA-206ENST00000420646 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
SNCA-206ENST00000420646 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
SNCA-206ENST00000420646 NBPF6Q5VWK0 638 aa11.15□□□□□ -0.62
SNCA-206ENST00000420646 NBPF4Q96M43 638 aa11.15□□□□□ -0.62
SNCA-206ENST00000420646 TSPYL4Q9UJ04 414 aa11.15□□□□□ -0.62
SNCA-206ENST00000420646 IGSF1Q8N6C5 1336 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms