RNA–Protein interactions for RNA: ENST00000404168.1

CMPK2-202, Transcript of cytidine/uridine monophosphate kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMPK2, Length 2,042 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK2-202ENST00000404168 CT47B1P0C2W7 299 aaPredicted RBP28.45■■■□□ 2.14
CMPK2-202ENST00000404168 RLBP1P12271 317 aa28.45■■■□□ 2.14
CMPK2-202ENST00000404168 C14orf37Q86TY3 774 aa28.44■■■□□ 2.14
CMPK2-202ENST00000404168 BCL11AQ9H165 835 aa28.44■■■□□ 2.14
CMPK2-202ENST00000404168 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
CMPK2-202ENST00000404168 TTC21AQ8NDW8 1320 aa28.43■■■□□ 2.14
CMPK2-202ENST00000404168 STRCQ7RTU9 1775 aa28.43■■■□□ 2.14
CMPK2-202ENST00000404168 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
CMPK2-202ENST00000404168 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
CMPK2-202ENST00000404168 TMPOP42166 694 aaKnown RBP28.42■■■□□ 2.14
CMPK2-202ENST00000404168 PHF8Q9UPP1 1060 aa28.42■■■□□ 2.14
CMPK2-202ENST00000404168 TNNQ9UQP3 1299 aa28.42■■■□□ 2.14
CMPK2-202ENST00000404168 USP35Q9P2H5 1018 aa28.41■■■□□ 2.14
CMPK2-202ENST00000404168 TRIM35Q9UPQ4 493 aa28.4■■■□□ 2.14
CMPK2-202ENST00000404168 LAS1LQ9Y4W2 734 aaKnown RBP28.4■■■□□ 2.14
CMPK2-202ENST00000404168 DIAPH1O60610 1272 aaKnown RBP28.4■■■□□ 2.14
CMPK2-202ENST00000404168 PIK3C2AO00443 1686 aa28.39■■■□□ 2.14
CMPK2-202ENST00000404168 U2SURPO15042 1029 aaKnown RBP28.39■■■□□ 2.14
CMPK2-202ENST00000404168 RRS1Q15050 365 aaKnown RBP28.39■■■□□ 2.14
CMPK2-202ENST00000404168 BCL2L13Q9BXK5 485 aa28.39■■■□□ 2.14
CMPK2-202ENST00000404168 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.14
CMPK2-202ENST00000404168 PCDHB15Q9Y5E8 787 aa28.38■■■□□ 2.13
CMPK2-202ENST00000404168 USP31Q70CQ4 1352 aa28.38■■■□□ 2.13
CMPK2-202ENST00000404168 IL16Q14005 1332 aa28.38■■■□□ 2.13
CMPK2-202ENST00000404168 TMEM94Q12767 1356 aa28.36■■■□□ 2.13
CMPK2-202ENST00000404168 ESCO1Q5FWF5 840 aa28.35■■■□□ 2.13
CMPK2-202ENST00000404168 TSR2Q969E8 191 aaKnown RBP28.34■■■□□ 2.13
CMPK2-202ENST00000404168 C19orf44Q9H6X5 657 aa28.34■■■□□ 2.13
CMPK2-202ENST00000404168 ZKSCAN2Q63HK3 967 aa28.33■■■□□ 2.13
CMPK2-202ENST00000404168 NEFMP07197 916 aa28.33■■■□□ 2.13
CMPK2-202ENST00000404168 MVPQ14764 893 aaKnown RBP28.33■■■□□ 2.13
CMPK2-202ENST00000404168 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
CMPK2-202ENST00000404168 EXOSC9Q06265 439 aaKnown RBP28.31■■■□□ 2.12
CMPK2-202ENST00000404168 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
CMPK2-202ENST00000404168 USP19O94966 1318 aa28.31■■■□□ 2.12
CMPK2-202ENST00000404168 MARF1Q9Y4F3 1742 aaKnown RBP28.3■■■□□ 2.12
CMPK2-202ENST00000404168 IL13P35225 146 aa28.3■■■□□ 2.12
CMPK2-202ENST00000404168 NCOA3Q9Y6Q9 1424 aa28.3■■■□□ 2.12
CMPK2-202ENST00000404168 DZIP1LQ8IYY4 767 aaKnown RBP28.29■■■□□ 2.12
CMPK2-202ENST00000404168 USP54Q70EL1 1684 aa28.29■■■□□ 2.12
CMPK2-202ENST00000404168 PEAK1Q9H792 1746 aa28.29■■■□□ 2.12
CMPK2-202ENST00000404168 C1orf167Q5SNV9 1468 aa28.29■■■□□ 2.12
CMPK2-202ENST00000404168 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
CMPK2-202ENST00000404168 RWDD1Q9H446 243 aaPredicted RBP28.28■■■□□ 2.12
CMPK2-202ENST00000404168 FCHSD2O94868 740 aa28.27■■■□□ 2.12
CMPK2-202ENST00000404168 SLC4A3P48751 1232 aa28.27■■■□□ 2.12
CMPK2-202ENST00000404168 RIPK4P57078 832 aa28.27■■■□□ 2.12
CMPK2-202ENST00000404168 NLRP6P59044 892 aa28.27■■■□□ 2.12
CMPK2-202ENST00000404168 SOX12O15370 315 aa28.26■■■□□ 2.12
CMPK2-202ENST00000404168 NUTM2GQ5VZR2 741 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 DAXXQ9UER7 740 aaPredicted RBP28.25■■■□□ 2.11
CMPK2-202ENST00000404168 PDZRN3Q9UPQ7 1066 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 DCCP43146 1447 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 SSH1Q8WYL5 1049 aa28.25■■■□□ 2.11
CMPK2-202ENST00000404168 MST1RQ04912 1400 aa28.24■■■□□ 2.11
CMPK2-202ENST00000404168 PSME1Q06323 249 aa28.24■■■□□ 2.11
CMPK2-202ENST00000404168 FTSJ3Q8IY81 847 aaKnown RBP28.23■■■□□ 2.11
CMPK2-202ENST00000404168 MAP3K19Q56UN5 1328 aa28.23■■■□□ 2.11
CMPK2-202ENST00000404168 TRIM27P14373 513 aa28.23■■■□□ 2.11
CMPK2-202ENST00000404168 RSPH6AQ9H0K4 717 aa28.23■■■□□ 2.11
CMPK2-202ENST00000404168 FOXO3O43524 673 aa28.22■■■□□ 2.11
CMPK2-202ENST00000404168 XIRP1Q702N8 1843 aaKnown RBP28.22■■■□□ 2.11
CMPK2-202ENST00000404168 ATF3P18847 181 aa28.21■■■□□ 2.11
CMPK2-202ENST00000404168 SEC24BO95487 1268 aa28.2■■■□□ 2.11
CMPK2-202ENST00000404168 ATF7IPQ6VMQ6 1270 aa28.2■■■□□ 2.11
CMPK2-202ENST00000404168 ZNF335Q9H4Z2 1342 aaPredicted RBP28.2■■■□□ 2.1
CMPK2-202ENST00000404168 KIF1AQ12756 1690 aa28.2■■■□□ 2.1
CMPK2-202ENST00000404168 EIF4A2Q14240 407 aaKnown RBP28.19■■■□□ 2.1
CMPK2-202ENST00000404168 HSP90AB2PQ58FF8 381 aa28.19■■■□□ 2.1
CMPK2-202ENST00000404168 HMOX1P09601 288 aa28.19■■■□□ 2.1
CMPK2-202ENST00000404168 PRKAR2BP31323 418 aa28.18■■■□□ 2.1
CMPK2-202ENST00000404168 XPCQ01831 940 aaPredicted RBP28.18■■■□□ 2.1
CMPK2-202ENST00000404168 DDX19BQ9UMR2 479 aa28.18■■■□□ 2.1
CMPK2-202ENST00000404168 SBNO1A3KN83 1393 aa28.16■■■□□ 2.1
CMPK2-202ENST00000404168 HDAC1Q13547 482 aaPredicted RBP28.16■■■□□ 2.1
CMPK2-202ENST00000404168 NFKBIBQ15653 356 aa28.16■■■□□ 2.1
CMPK2-202ENST00000404168 NOB1Q9ULX3 412 aaKnown RBP28.16■■■□□ 2.1
CMPK2-202ENST00000404168 TRPM3Q9HCF6 1732 aaPredicted RBP28.16■■■□□ 2.1
CMPK2-202ENST00000404168 ALDH1L2Q3SY69 923 aa28.15■■■□□ 2.1
CMPK2-202ENST00000404168 FLT4P35916 1363 aa28.15■■■□□ 2.1
CMPK2-202ENST00000404168 MSH6P52701 1360 aa28.15■■■□□ 2.1
CMPK2-202ENST00000404168 CADPS2Q86UW7 1296 aa28.14■■■□□ 2.1
CMPK2-202ENST00000404168 KIF16BQ96L93 1317 aa28.14■■■□□ 2.1
CMPK2-202ENST00000404168 PHACTR3Q96KR7 559 aa28.13■■■□□ 2.09
CMPK2-202ENST00000404168 RGPD1P0DJD0 1748 aa28.12■■■□□ 2.09
CMPK2-202ENST00000404168 BRPF1P55201 1214 aaPredicted RBP28.12■■■□□ 2.09
CMPK2-202ENST00000404168 KRT28Q7Z3Y7 464 aa28.12■■■□□ 2.09
CMPK2-202ENST00000404168 ZNF428Q96B54 188 aa28.12■■■□□ 2.09
CMPK2-202ENST00000404168 NFE2L2Q16236 605 aa28.11■■■□□ 2.09
CMPK2-202ENST00000404168 NFAT5O94916 1531 aa28.11■■■□□ 2.09
CMPK2-202ENST00000404168 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
CMPK2-202ENST00000404168 ITPRIPQ8IWB1 547 aa28.11■■■□□ 2.09
CMPK2-202ENST00000404168 AMPHP49418 695 aa28.1■■■□□ 2.09
CMPK2-202ENST00000404168 TMEM57Q8N5G2 664 aa28.09■■■□□ 2.09
CMPK2-202ENST00000404168 ZBTB40Q9NUA8 1239 aa28.09■■■□□ 2.09
CMPK2-202ENST00000404168 KIF24Q5T7B8 1368 aa28.08■■■□□ 2.09
CMPK2-202ENST00000404168 AEBP1Q8IUX7 1158 aa28.08■■■□□ 2.09
CMPK2-202ENST00000404168 HOXC9P31274 260 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms