RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 NLRP6P59044 892 aa15.86■□□□□ 0.13
CLIP4-203ENST00000401617 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
CLIP4-203ENST00000401617 RBM33Q96EV2 1170 aaKnown RBP15.86■□□□□ 0.13
CLIP4-203ENST00000401617 ARHGEF10O15013 1369 aa15.86■□□□□ 0.13
CLIP4-203ENST00000401617 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
CLIP4-203ENST00000401617 CALD1Q05682 793 aaKnown RBP15.85■□□□□ 0.13
CLIP4-203ENST00000401617 ZNF853P0CG23 659 aa15.85■□□□□ 0.13
CLIP4-203ENST00000401617 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
CLIP4-203ENST00000401617 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
CLIP4-203ENST00000401617 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
CLIP4-203ENST00000401617 KDRP35968 1356 aa15.83■□□□□ 0.13
CLIP4-203ENST00000401617 ABTB2Q8N961 1025 aa15.83■□□□□ 0.13
CLIP4-203ENST00000401617 STRCP1A6NGW2 1772 aa15.83■□□□□ 0.12
CLIP4-203ENST00000401617 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
CLIP4-203ENST00000401617 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
CLIP4-203ENST00000401617 AAMPQ13685 434 aa15.82■□□□□ 0.12
CLIP4-203ENST00000401617 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
CLIP4-203ENST00000401617 NFAT5O94916 1531 aa15.82■□□□□ 0.12
CLIP4-203ENST00000401617 LTN1O94822 1766 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 SOX12O15370 315 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 AMPHP49418 695 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 GNAI1P63096 354 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 CENPQQ7L2Z9 268 aaPredicted RBP15.81■□□□□ 0.12
CLIP4-203ENST00000401617 PANK1Q8TE04 598 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 NCOA3Q9Y6Q9 1424 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 PHRF1Q9P1Y6 1649 aaKnown RBP15.81■□□□□ 0.12
CLIP4-203ENST00000401617 KIF1AQ12756 1690 aa15.81■□□□□ 0.12
CLIP4-203ENST00000401617 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
CLIP4-203ENST00000401617 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
CLIP4-203ENST00000401617 HOXC9P31274 260 aa15.8■□□□□ 0.12
CLIP4-203ENST00000401617 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
CLIP4-203ENST00000401617 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
CLIP4-203ENST00000401617 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
CLIP4-203ENST00000401617 C19orf44Q9H6X5 657 aa15.8■□□□□ 0.12
CLIP4-203ENST00000401617 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
CLIP4-203ENST00000401617 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
CLIP4-203ENST00000401617 RLBP1P12271 317 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 ALDH1L2Q3SY69 923 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
CLIP4-203ENST00000401617 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 C1orf167Q5SNV9 1468 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 TCERG1O14776 1098 aaKnown RBP15.79■□□□□ 0.12
CLIP4-203ENST00000401617 PSME1Q06323 249 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
CLIP4-203ENST00000401617 ZKSCAN2Q63HK3 967 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 ORAI2Q96SN7 254 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 EYA1Q99502 592 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 COG6Q9Y2V7 657 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 DCCP43146 1447 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 MST1RQ04912 1400 aa15.78■□□□□ 0.12
CLIP4-203ENST00000401617 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
CLIP4-203ENST00000401617 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
CLIP4-203ENST00000401617 MS4A1P11836 297 aa15.77■□□□□ 0.11
CLIP4-203ENST00000401617 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.11
CLIP4-203ENST00000401617 MBIPQ9NS73 344 aa15.77■□□□□ 0.11
CLIP4-203ENST00000401617 FAM83GA6ND36 823 aa15.76■□□□□ 0.11
CLIP4-203ENST00000401617 SLIT3O75094 1523 aa15.76■□□□□ 0.11
CLIP4-203ENST00000401617 VAMP4O75379 141 aa15.76■□□□□ 0.11
CLIP4-203ENST00000401617 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
CLIP4-203ENST00000401617 KCNH5Q8NCM2 988 aa15.75■□□□□ 0.11
CLIP4-203ENST00000401617 IP6K1Q92551 441 aa15.75■□□□□ 0.11
CLIP4-203ENST00000401617 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
CLIP4-203ENST00000401617 TMEM94Q12767 1356 aa15.74■□□□□ 0.11
CLIP4-203ENST00000401617 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
CLIP4-203ENST00000401617 FOXO3O43524 673 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 TRIM27P14373 513 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
CLIP4-203ENST00000401617 ATF7IPQ6VMQ6 1270 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 STRCQ7RTU9 1775 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 CRB1P82279 1406 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 CHL1O00533 1208 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 USP19O94966 1318 aa15.73■□□□□ 0.11
CLIP4-203ENST00000401617 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
CLIP4-203ENST00000401617 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
CLIP4-203ENST00000401617 TSPYL6Q8N831 410 aa15.72■□□□□ 0.11
CLIP4-203ENST00000401617 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
CLIP4-203ENST00000401617 LMTK3Q96Q04 1460 aa15.72■□□□□ 0.11
CLIP4-203ENST00000401617 XIRP1Q702N8 1843 aaKnown RBP15.72■□□□□ 0.11
CLIP4-203ENST00000401617 IPO8O15397 1037 aaKnown RBP15.72■□□□□ 0.11
CLIP4-203ENST00000401617 HSPA2P54652 639 aa15.71■□□□□ 0.11
CLIP4-203ENST00000401617 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
CLIP4-203ENST00000401617 LRRC37A3O60309 1634 aa15.71■□□□□ 0.11
CLIP4-203ENST00000401617 HTATSF1O43719 755 aaKnown RBP15.7■□□□□ 0.1
CLIP4-203ENST00000401617 IGHDP01880 384 aa15.7■□□□□ 0.1
CLIP4-203ENST00000401617 KRT28Q7Z3Y7 464 aa15.7■□□□□ 0.1
CLIP4-203ENST00000401617 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
CLIP4-203ENST00000401617 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
CLIP4-203ENST00000401617 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
CLIP4-203ENST00000401617 KIAA0232Q92628 1395 aa15.7■□□□□ 0.1
CLIP4-203ENST00000401617 ATF3P18847 181 aa15.69■□□□□ 0.1
CLIP4-203ENST00000401617 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
CLIP4-203ENST00000401617 MCM10Q7L590 875 aa15.69■□□□□ 0.1
CLIP4-203ENST00000401617 ARHGEF25Q86VW2 580 aa15.69■□□□□ 0.1
CLIP4-203ENST00000401617 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms