RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NUDT16Q96DE0 195 aaKnown RBP18.69■□□□□ 0.58
GNE-202ENST00000396594 ZNF287Q9HBT7 754 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 PES1O00541 588 aaKnown RBP18.69■□□□□ 0.58
GNE-202ENST00000396594 WASF1Q92558 559 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 PLCH2O75038 1416 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 CTTNBP2Q8WZ74 1663 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
GNE-202ENST00000396594 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
GNE-202ENST00000396594 IL16Q14005 1332 aa18.67■□□□□ 0.58
GNE-202ENST00000396594 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
GNE-202ENST00000396594 TRIM22Q8IYM9 498 aa18.67■□□□□ 0.58
GNE-202ENST00000396594 PRDM11Q9NQV5 511 aa18.67■□□□□ 0.58
GNE-202ENST00000396594 R3HCC1Q9Y3T6 440 aaKnown RBP18.67■□□□□ 0.58
GNE-202ENST00000396594 CNNM1Q9NRU3 951 aa18.66■□□□□ 0.58
GNE-202ENST00000396594 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
GNE-202ENST00000396594 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
GNE-202ENST00000396594 PCMTD1Q96MG8 357 aaPredicted RBP18.66■□□□□ 0.58
GNE-202ENST00000396594 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
GNE-202ENST00000396594 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 VPS37CA5D8V6 355 aaPredicted RBP18.65■□□□□ 0.58
GNE-202ENST00000396594 CCDC173Q0VFZ6 552 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 FILIP1LQ4L180 1135 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
GNE-202ENST00000396594 CYP46A1Q9Y6A2 500 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
GNE-202ENST00000396594 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 MTERF4Q7Z6M4 381 aaKnown RBP18.65■□□□□ 0.58
GNE-202ENST00000396594 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
GNE-202ENST00000396594 SMARCE1Q969G3 411 aa18.64■□□□□ 0.57
GNE-202ENST00000396594 MRE11P49959 708 aa18.64■□□□□ 0.57
GNE-202ENST00000396594 SETQ01105 290 aaPredicted RBP18.64■□□□□ 0.57
GNE-202ENST00000396594 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
GNE-202ENST00000396594 WWC2Q6AWC2 1192 aa18.64■□□□□ 0.57
GNE-202ENST00000396594 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
GNE-202ENST00000396594 NOL7Q9UMY1 257 aaKnown RBP18.64■□□□□ 0.57
GNE-202ENST00000396594 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
GNE-202ENST00000396594 ERCC4Q92889 916 aaPredicted RBP18.63■□□□□ 0.57
GNE-202ENST00000396594 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
GNE-202ENST00000396594 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
GNE-202ENST00000396594 WDR33Q9C0J8 1336 aaKnown RBP18.63■□□□□ 0.57
GNE-202ENST00000396594 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
GNE-202ENST00000396594 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
GNE-202ENST00000396594 PTPRCP08575 1304 aa18.62■□□□□ 0.57
GNE-202ENST00000396594 PANK1Q8TE04 598 aa18.62■□□□□ 0.57
GNE-202ENST00000396594 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
GNE-202ENST00000396594 ABCC10Q5T3U5 1492 aa18.62■□□□□ 0.57
GNE-202ENST00000396594 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
GNE-202ENST00000396594 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
GNE-202ENST00000396594 KINO60870 393 aaKnown RBP18.61■□□□□ 0.57
GNE-202ENST00000396594 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
GNE-202ENST00000396594 BTBD11A6QL63 1104 aa18.61■□□□□ 0.57
GNE-202ENST00000396594 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
GNE-202ENST00000396594 NOB1Q9ULX3 412 aaKnown RBP18.61■□□□□ 0.57
GNE-202ENST00000396594 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
GNE-202ENST00000396594 TCOF1Q13428 1488 aaKnown RBP18.6■□□□□ 0.57
GNE-202ENST00000396594 TNRQ92752 1358 aa18.6■□□□□ 0.57
GNE-202ENST00000396594 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
GNE-202ENST00000396594 STIM1Q13586 685 aa18.6■□□□□ 0.57
GNE-202ENST00000396594 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
GNE-202ENST00000396594 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
GNE-202ENST00000396594 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
GNE-202ENST00000396594 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
GNE-202ENST00000396594 SLF2Q8IX21 1173 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 AK7Q96M32 723 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 PDZRN3Q9UPQ7 1066 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
GNE-202ENST00000396594 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 EPS15P42566 896 aa18.59■□□□□ 0.57
GNE-202ENST00000396594 DNAI2Q9GZS0 605 aa18.58■□□□□ 0.57
GNE-202ENST00000396594 A0A087WZG4 1122 aa18.58■□□□□ 0.57
GNE-202ENST00000396594 CAVIN1Q6NZI2 390 aaKnown RBP18.58■□□□□ 0.57
GNE-202ENST00000396594 MAGEC2Q9UBF1 373 aaPredicted RBP18.58■□□□□ 0.57
GNE-202ENST00000396594 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.56
GNE-202ENST00000396594 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
GNE-202ENST00000396594 SLFN5Q08AF3 891 aa18.58■□□□□ 0.56
GNE-202ENST00000396594 PHF8Q9UPP1 1060 aa18.58■□□□□ 0.56
GNE-202ENST00000396594 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
GNE-202ENST00000396594 HYPKQ9NX55 129 aa18.57■□□□□ 0.56
GNE-202ENST00000396594 HMGB1P09429 215 aaKnown RBP18.57■□□□□ 0.56
GNE-202ENST00000396594 A2MP01023 1474 aa18.57■□□□□ 0.56
GNE-202ENST00000396594 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
GNE-202ENST00000396594 CEP131Q9UPN4 1083 aa18.57■□□□□ 0.56
GNE-202ENST00000396594 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
GNE-202ENST00000396594 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
GNE-202ENST00000396594 CBFA2T2O43439 604 aa18.56■□□□□ 0.56
GNE-202ENST00000396594 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 SOGA3Q5TF21 947 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 CADPS2Q86UW7 1296 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 CHD1LQ86WJ1 897 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms