RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 C1orf167Q5SNV9 1468 aa19.91■□□□□ 0.78
RAPGEF3-203ENST00000395360 EDC4Q6P2E9 1401 aaKnown RBP19.9■□□□□ 0.78
RAPGEF3-203ENST00000395360 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
RAPGEF3-203ENST00000395360 FCHSD2O94868 740 aa19.9■□□□□ 0.78
RAPGEF3-203ENST00000395360 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
RAPGEF3-203ENST00000395360 NME9Q86XW9 330 aa19.9■□□□□ 0.78
RAPGEF3-203ENST00000395360 CT47B1P0C2W7 299 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-203ENST00000395360 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
RAPGEF3-203ENST00000395360 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
RAPGEF3-203ENST00000395360 C8orf34Q49A92 452 aa19.88■□□□□ 0.77
RAPGEF3-203ENST00000395360 CERKQ8TCT0 537 aa19.88■□□□□ 0.77
RAPGEF3-203ENST00000395360 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
RAPGEF3-203ENST00000395360 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 PRKAR2BP31323 418 aa19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 SLAIN2Q9P270 581 aa19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 IL16Q14005 1332 aa19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-203ENST00000395360 AAMPQ13685 434 aa19.86■□□□□ 0.77
RAPGEF3-203ENST00000395360 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
RAPGEF3-203ENST00000395360 ZKSCAN2Q63HK3 967 aa19.86■□□□□ 0.77
RAPGEF3-203ENST00000395360 SMC4Q9NTJ3 1288 aa19.86■□□□□ 0.77
RAPGEF3-203ENST00000395360 KIF1AQ12756 1690 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 NBR1Q14596 966 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 NEFMP07197 916 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 HMOX1P09601 288 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 PCDHB15Q9Y5E8 787 aa19.85■□□□□ 0.77
RAPGEF3-203ENST00000395360 FTSJ3Q8IY81 847 aaKnown RBP19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 PHF8Q9UPP1 1060 aa19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 TOM1O60784 492 aa19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 COG3Q96JB2 828 aa19.84■□□□□ 0.77
RAPGEF3-203ENST00000395360 MVPQ14764 893 aaKnown RBP19.83■□□□□ 0.76
RAPGEF3-203ENST00000395360 DZIP1LQ8IYY4 767 aaKnown RBP19.82■□□□□ 0.76
RAPGEF3-203ENST00000395360 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
RAPGEF3-203ENST00000395360 ZNF692Q9BU19 519 aaPredicted RBP19.82■□□□□ 0.76
RAPGEF3-203ENST00000395360 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
RAPGEF3-203ENST00000395360 IL13P35225 146 aa19.81■□□□□ 0.76
RAPGEF3-203ENST00000395360 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
RAPGEF3-203ENST00000395360 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
RAPGEF3-203ENST00000395360 MON2Q7Z3U7 1717 aa19.8■□□□□ 0.76
RAPGEF3-203ENST00000395360 ACEP12821 1306 aa19.8■□□□□ 0.76
RAPGEF3-203ENST00000395360 TRIM27P14373 513 aa19.8■□□□□ 0.76
RAPGEF3-203ENST00000395360 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
RAPGEF3-203ENST00000395360 DDRGK1Q96HY6 314 aa19.8■□□□□ 0.76
RAPGEF3-203ENST00000395360 AKAP12Q02952 1782 aa19.79■□□□□ 0.76
RAPGEF3-203ENST00000395360 CDK12Q9NYV4 1490 aaPredicted RBP19.79■□□□□ 0.76
RAPGEF3-203ENST00000395360 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
RAPGEF3-203ENST00000395360 NFE2L2Q16236 605 aa19.78■□□□□ 0.76
RAPGEF3-203ENST00000395360 ATF7IPQ6VMQ6 1270 aa19.77■□□□□ 0.76
RAPGEF3-203ENST00000395360 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
RAPGEF3-203ENST00000395360 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
RAPGEF3-203ENST00000395360 UBAP1LF5GYI3 381 aa19.76■□□□□ 0.75
RAPGEF3-203ENST00000395360 USP6P35125 1406 aa19.76■□□□□ 0.75
RAPGEF3-203ENST00000395360 RWDD1Q9H446 243 aaPredicted RBP19.76■□□□□ 0.75
RAPGEF3-203ENST00000395360 NPHP3Q7Z494 1330 aa19.76■□□□□ 0.75
RAPGEF3-203ENST00000395360 ITPRIPQ8IWB1 547 aa19.75■□□□□ 0.75
RAPGEF3-203ENST00000395360 THUMPD2Q9BTF0 503 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-203ENST00000395360 ROBO1Q9Y6N7 1651 aa19.74■□□□□ 0.75
RAPGEF3-203ENST00000395360 DDX19BQ9UMR2 479 aa19.74■□□□□ 0.75
RAPGEF3-203ENST00000395360 KIF16BQ96L93 1317 aa19.74■□□□□ 0.75
RAPGEF3-203ENST00000395360 FOXO3O43524 673 aa19.73■□□□□ 0.75
RAPGEF3-203ENST00000395360 PSME1Q06323 249 aa19.73■□□□□ 0.75
RAPGEF3-203ENST00000395360 SSH2Q76I76 1423 aa19.73■□□□□ 0.75
RAPGEF3-203ENST00000395360 NRKQ7Z2Y5 1582 aa19.73■□□□□ 0.75
RAPGEF3-203ENST00000395360 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
RAPGEF3-203ENST00000395360 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
RAPGEF3-203ENST00000395360 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
RAPGEF3-203ENST00000395360 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
RAPGEF3-203ENST00000395360 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
RAPGEF3-203ENST00000395360 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
RAPGEF3-203ENST00000395360 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
RAPGEF3-203ENST00000395360 TTC21AQ8NDW8 1320 aa19.7■□□□□ 0.74
RAPGEF3-203ENST00000395360 AHDC1Q5TGY3 1603 aaPredicted RBP19.7■□□□□ 0.74
RAPGEF3-203ENST00000395360 PXDNQ92626 1479 aa19.7■□□□□ 0.74
RAPGEF3-203ENST00000395360 VIRMAQ69YN4 1812 aaKnown RBP19.7■□□□□ 0.74
RAPGEF3-203ENST00000395360 GNAI1P63096 354 aa19.69■□□□□ 0.74
RAPGEF3-203ENST00000395360 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
RAPGEF3-203ENST00000395360 SLC4A3P48751 1232 aa19.69■□□□□ 0.74
RAPGEF3-203ENST00000395360 IFT57Q9NWB7 429 aa19.69■□□□□ 0.74
RAPGEF3-203ENST00000395360 SBNO1A3KN83 1393 aa19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 TRPM3Q9HCF6 1732 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-203ENST00000395360 VAMP4O75379 141 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 MBIPQ9NS73 344 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 DAXXQ9UER7 740 aaPredicted RBP19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 FAM83GA6ND36 823 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 SEC24BO95487 1268 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 LMOD3Q0VAK6 560 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 TSPYL6Q8N831 410 aa19.67■□□□□ 0.74
RAPGEF3-203ENST00000395360 DLG5Q8TDM6 1919 aa19.66■□□□□ 0.74
RAPGEF3-203ENST00000395360 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
RAPGEF3-203ENST00000395360 EIF4A2Q14240 407 aaKnown RBP19.66■□□□□ 0.74
RAPGEF3-203ENST00000395360 OVOS2A0A0J9YW53 1432 aa19.66■□□□□ 0.74
RAPGEF3-203ENST00000395360 OVOS2Q6IE36 1432 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms