RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.42
SIL1-202ENST00000394817 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
SIL1-202ENST00000394817 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
SIL1-202ENST00000394817 TTC21BQ7Z4L5 1316 aa23.88■■□□□ 1.41
SIL1-202ENST00000394817 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
SIL1-202ENST00000394817 RBM33Q96EV2 1170 aaKnown RBP23.87■■□□□ 1.41
SIL1-202ENST00000394817 SMC4Q9NTJ3 1288 aa23.87■■□□□ 1.41
SIL1-202ENST00000394817 HMOX1P09601 288 aa23.86■■□□□ 1.41
SIL1-202ENST00000394817 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
SIL1-202ENST00000394817 FAM161AQ3B820 660 aa23.86■■□□□ 1.41
SIL1-202ENST00000394817 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
SIL1-202ENST00000394817 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
SIL1-202ENST00000394817 NPM2Q86SE8 214 aaKnown RBP23.86■■□□□ 1.41
SIL1-202ENST00000394817 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
SIL1-202ENST00000394817 SSH1Q8WYL5 1049 aa23.85■■□□□ 1.41
SIL1-202ENST00000394817 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
SIL1-202ENST00000394817 C8orf34Q49A92 452 aa23.84■■□□□ 1.41
SIL1-202ENST00000394817 DZIP1LQ8IYY4 767 aaKnown RBP23.84■■□□□ 1.41
SIL1-202ENST00000394817 ZBTB47Q9UFB7 747 aaPredicted RBP23.84■■□□□ 1.41
SIL1-202ENST00000394817 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
SIL1-202ENST00000394817 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
SIL1-202ENST00000394817 RGS3P49796 1198 aa23.83■■□□□ 1.41
SIL1-202ENST00000394817 CALD1Q05682 793 aaKnown RBP23.83■■□□□ 1.41
SIL1-202ENST00000394817 FTSJ3Q8IY81 847 aaKnown RBP23.83■■□□□ 1.41
SIL1-202ENST00000394817 PCDHB15Q9Y5E8 787 aa23.82■■□□□ 1.4
SIL1-202ENST00000394817 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
SIL1-202ENST00000394817 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
SIL1-202ENST00000394817 TRIM27P14373 513 aa23.81■■□□□ 1.4
SIL1-202ENST00000394817 ALDH1L2Q3SY69 923 aa23.81■■□□□ 1.4
SIL1-202ENST00000394817 ANKARQ7Z5J8 1434 aa23.81■■□□□ 1.4
SIL1-202ENST00000394817 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
SIL1-202ENST00000394817 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
SIL1-202ENST00000394817 NWD1Q149M9 1564 aa23.8■■□□□ 1.4
SIL1-202ENST00000394817 TTC21AQ8NDW8 1320 aa23.78■■□□□ 1.4
SIL1-202ENST00000394817 LMOD3Q0VAK6 560 aa23.78■■□□□ 1.4
SIL1-202ENST00000394817 IFT57Q9NWB7 429 aa23.78■■□□□ 1.4
SIL1-202ENST00000394817 BRPF1P55201 1214 aaPredicted RBP23.77■■□□□ 1.4
SIL1-202ENST00000394817 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
SIL1-202ENST00000394817 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
SIL1-202ENST00000394817 GNAI1P63096 354 aa23.76■■□□□ 1.39
SIL1-202ENST00000394817 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
SIL1-202ENST00000394817 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
SIL1-202ENST00000394817 DDX19BQ9UMR2 479 aa23.76■■□□□ 1.39
SIL1-202ENST00000394817 ZNF853P0CG23 659 aa23.75■■□□□ 1.39
SIL1-202ENST00000394817 RWDD1Q9H446 243 aaPredicted RBP23.75■■□□□ 1.39
SIL1-202ENST00000394817 USP54Q70EL1 1684 aa23.75■■□□□ 1.39
SIL1-202ENST00000394817 IPO8O15397 1037 aaKnown RBP23.74■■□□□ 1.39
SIL1-202ENST00000394817 EIF4A2Q14240 407 aaKnown RBP23.74■■□□□ 1.39
SIL1-202ENST00000394817 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
SIL1-202ENST00000394817 DDRGK1Q96HY6 314 aa23.73■■□□□ 1.39
SIL1-202ENST00000394817 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
SIL1-202ENST00000394817 HSPA2P54652 639 aa23.72■■□□□ 1.39
SIL1-202ENST00000394817 LAS1LQ9Y4W2 734 aaKnown RBP23.72■■□□□ 1.39
SIL1-202ENST00000394817 MARF1Q9Y4F3 1742 aaKnown RBP23.71■■□□□ 1.39
SIL1-202ENST00000394817 ITPRIPQ8IWB1 547 aa23.71■■□□□ 1.39
SIL1-202ENST00000394817 CFAP44Q96MT7 982 aa23.7■■□□□ 1.38
SIL1-202ENST00000394817 MBIPQ9NS73 344 aa23.7■■□□□ 1.38
SIL1-202ENST00000394817 STRCP1A6NGW2 1772 aa23.69■■□□□ 1.38
SIL1-202ENST00000394817 VAMP4O75379 141 aa23.69■■□□□ 1.38
SIL1-202ENST00000394817 TMEM57Q8N5G2 664 aa23.69■■□□□ 1.38
SIL1-202ENST00000394817 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
SIL1-202ENST00000394817 HDAC1Q13547 482 aaPredicted RBP23.68■■□□□ 1.38
SIL1-202ENST00000394817 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
SIL1-202ENST00000394817 SULT6B1Q6IMI4 303 aa23.67■■□□□ 1.38
SIL1-202ENST00000394817 AEBP1Q8IUX7 1158 aa23.67■■□□□ 1.38
SIL1-202ENST00000394817 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
SIL1-202ENST00000394817 SBNO1A3KN83 1393 aa23.66■■□□□ 1.38
SIL1-202ENST00000394817 ZBTB40Q9NUA8 1239 aa23.66■■□□□ 1.38
SIL1-202ENST00000394817 FLT4P35916 1363 aa23.66■■□□□ 1.38
SIL1-202ENST00000394817 HSP90AB2PQ58FF8 381 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
SIL1-202ENST00000394817 TSPYL6Q8N831 410 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 PHF8Q9UPP1 1060 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 SOX12O15370 315 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 MAP3K19Q56UN5 1328 aa23.65■■□□□ 1.38
SIL1-202ENST00000394817 MRPL50Q8N5N7 158 aaKnown RBP23.65■■□□□ 1.38
SIL1-202ENST00000394817 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
SIL1-202ENST00000394817 LMTK3Q96Q04 1460 aa23.63■■□□□ 1.37
SIL1-202ENST00000394817 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
SIL1-202ENST00000394817 KDRP35968 1356 aa23.61■■□□□ 1.37
SIL1-202ENST00000394817 ESCO1Q5FWF5 840 aa23.61■■□□□ 1.37
SIL1-202ENST00000394817 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
SIL1-202ENST00000394817 NUTM2GQ5VZR2 741 aa23.6■■□□□ 1.37
SIL1-202ENST00000394817 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
SIL1-202ENST00000394817 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
SIL1-202ENST00000394817 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
SIL1-202ENST00000394817 SMC5Q8IY18 1101 aa23.59■■□□□ 1.37
SIL1-202ENST00000394817 ABCC4O15439 1325 aa23.58■■□□□ 1.37
SIL1-202ENST00000394817 NLRP6P59044 892 aa23.57■■□□□ 1.36
SIL1-202ENST00000394817 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
SIL1-202ENST00000394817 USP19O94966 1318 aa23.57■■□□□ 1.36
SIL1-202ENST00000394817 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
SIL1-202ENST00000394817 IGSF1Q8N6C5 1336 aa23.56■■□□□ 1.36
SIL1-202ENST00000394817 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
SIL1-202ENST00000394817 ELL2O00472 640 aaPredicted RBP23.55■■□□□ 1.36
SIL1-202ENST00000394817 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
SIL1-202ENST00000394817 LRRC37A3O60309 1634 aa23.55■■□□□ 1.36
SIL1-202ENST00000394817 KIAA0232Q92628 1395 aa23.55■■□□□ 1.36
SIL1-202ENST00000394817 CHL1O00533 1208 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms