RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ARHGAP23Q9P227 1491 aa17.17■□□□□ 0.34
GTF2F1-201ENST00000394456 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
GTF2F1-201ENST00000394456 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-201ENST00000394456 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
GTF2F1-201ENST00000394456 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
GTF2F1-201ENST00000394456 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
GTF2F1-201ENST00000394456 COG3Q96JB2 828 aa17.15■□□□□ 0.34
GTF2F1-201ENST00000394456 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.33
GTF2F1-201ENST00000394456 RIMS1Q86UR5 1692 aaKnown RBP17.14■□□□□ 0.33
GTF2F1-201ENST00000394456 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
GTF2F1-201ENST00000394456 ACEP12821 1306 aa17.13■□□□□ 0.33
GTF2F1-201ENST00000394456 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
GTF2F1-201ENST00000394456 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
GTF2F1-201ENST00000394456 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
GTF2F1-201ENST00000394456 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-201ENST00000394456 ZBTB40Q9NUA8 1239 aa17.09■□□□□ 0.33
GTF2F1-201ENST00000394456 FCHSD2O94868 740 aa17.09■□□□□ 0.33
GTF2F1-201ENST00000394456 TTC21BQ7Z4L5 1316 aa17.09■□□□□ 0.33
GTF2F1-201ENST00000394456 SOX12O15370 315 aa17.08■□□□□ 0.33
GTF2F1-201ENST00000394456 LNPKQ9C0E8 428 aa17.08■□□□□ 0.33
GTF2F1-201ENST00000394456 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.33
GTF2F1-201ENST00000394456 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
GTF2F1-201ENST00000394456 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
GTF2F1-201ENST00000394456 ANTXR1Q9H6X2 564 aa17.08■□□□□ 0.32
GTF2F1-201ENST00000394456 DDX19BQ9UMR2 479 aa17.08■□□□□ 0.32
GTF2F1-201ENST00000394456 CDK12Q9NYV4 1490 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-201ENST00000394456 IL13P35225 146 aa17.07■□□□□ 0.32
GTF2F1-201ENST00000394456 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
GTF2F1-201ENST00000394456 AAMPQ13685 434 aa17.07■□□□□ 0.32
GTF2F1-201ENST00000394456 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-201ENST00000394456 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
GTF2F1-201ENST00000394456 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 KCNA6P17658 529 aa17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 USP6P35125 1406 aa17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
GTF2F1-201ENST00000394456 IL16Q14005 1332 aa17.05■□□□□ 0.32
GTF2F1-201ENST00000394456 BECN1Q14457 450 aa17.05■□□□□ 0.32
GTF2F1-201ENST00000394456 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
GTF2F1-201ENST00000394456 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
GTF2F1-201ENST00000394456 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
GTF2F1-201ENST00000394456 VAMP4O75379 141 aa17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 NFE2L2Q16236 605 aa17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
GTF2F1-201ENST00000394456 OVOS2A0A0J9YW53 1432 aa17.02■□□□□ 0.32
GTF2F1-201ENST00000394456 OVOS2Q6IE36 1432 aa17.02■□□□□ 0.32
GTF2F1-201ENST00000394456 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
GTF2F1-201ENST00000394456 ARXQ96QS3 562 aa17.02■□□□□ 0.32
GTF2F1-201ENST00000394456 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.32
GTF2F1-201ENST00000394456 KRT24Q2M2I5 525 aa17.02■□□□□ 0.31
GTF2F1-201ENST00000394456 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
GTF2F1-201ENST00000394456 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
GTF2F1-201ENST00000394456 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
GTF2F1-201ENST00000394456 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
GTF2F1-201ENST00000394456 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 NUCB1Q02818 461 aa16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
GTF2F1-201ENST00000394456 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
GTF2F1-201ENST00000394456 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
GTF2F1-201ENST00000394456 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
GTF2F1-201ENST00000394456 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
GTF2F1-201ENST00000394456 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
GTF2F1-201ENST00000394456 ADAMTSL3P82987 1691 aa16.97■□□□□ 0.31
GTF2F1-201ENST00000394456 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
GTF2F1-201ENST00000394456 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
GTF2F1-201ENST00000394456 SETD1BQ9UPS6 1966 aaKnown RBP16.96■□□□□ 0.31
GTF2F1-201ENST00000394456 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.31
GTF2F1-201ENST00000394456 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
GTF2F1-201ENST00000394456 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.3
GTF2F1-201ENST00000394456 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
GTF2F1-201ENST00000394456 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
GTF2F1-201ENST00000394456 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
GTF2F1-201ENST00000394456 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
GTF2F1-201ENST00000394456 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
GTF2F1-201ENST00000394456 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
GTF2F1-201ENST00000394456 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
GTF2F1-201ENST00000394456 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
GTF2F1-201ENST00000394456 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
GTF2F1-201ENST00000394456 CD2BP2O95400 341 aaKnown RBP16.92■□□□□ 0.3
GTF2F1-201ENST00000394456 GNAI1P63096 354 aa16.92■□□□□ 0.3
GTF2F1-201ENST00000394456 MCM10Q7L590 875 aa16.92■□□□□ 0.3
GTF2F1-201ENST00000394456 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
GTF2F1-201ENST00000394456 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
GTF2F1-201ENST00000394456 NLRP6P59044 892 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms