RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	U2SURP	O15042	1029 aa	Known RBP	11.98	□□□□□ -0.49
MITF-205	ENST00000394348	ANKLE2	Q86XL3	938 aa		11.98	□□□□□ -0.49
MITF-205	ENST00000394348	NME9	Q86XW9	330 aa		11.98	□□□□□ -0.49
MITF-205	ENST00000394348	CRBN	Q96SW2	442 aa		11.98	□□□□□ -0.49
MITF-205	ENST00000394348	NWD1	Q149M9	1564 aa		11.97	□□□□□ -0.49
MITF-205	ENST00000394348	NEFM	P07197	916 aa		11.97	□□□□□ -0.49
MITF-205	ENST00000394348	IL13	P35225	146 aa		11.97	□□□□□ -0.49
MITF-205	ENST00000394348	RSPH6A	Q9H0K4	717 aa		11.97	□□□□□ -0.49
MITF-205	ENST00000394348	DNAJC5	Q9H3Z4	198 aa		11.97	□□□□□ -0.49
MITF-205	ENST00000394348	RBM19	Q9Y4C8	960 aa	Known RBP	11.97	□□□□□ -0.49
MITF-205	ENST00000394348	KIF24	Q5T7B8	1368 aa		11.95	□□□□□ -0.5
MITF-205	ENST00000394348	PLIN1	O60240	522 aa		11.95	□□□□□ -0.5
MITF-205	ENST00000394348	CALD1	Q05682	793 aa	Known RBP	11.95	□□□□□ -0.5
MITF-205	ENST00000394348	RRP7A	Q9Y3A4	280 aa	Known RBP	11.95	□□□□□ -0.5
MITF-205	ENST00000394348	RGPD1	P0DJD0	1748 aa		11.94	□□□□□ -0.5
MITF-205	ENST00000394348	RARS	P54136	660 aa	Known RBP	11.94	□□□□□ -0.5
MITF-205	ENST00000394348	TRIM35	Q9UPQ4	493 aa		11.94	□□□□□ -0.5
MITF-205	ENST00000394348	NPHP4	O75161	1426 aa	Predicted RBP	11.94	□□□□□ -0.5
MITF-205	ENST00000394348	ADGRL3	Q9HAR2	1447 aa		11.94	□□□□□ -0.5
MITF-205	ENST00000394348	PIK3C2A	O00443	1686 aa		11.94	□□□□□ -0.5
MITF-205	ENST00000394348	NCKAP5L	Q9HCH0	1330 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	FANCI	Q9NVI1	1328 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	TCERG1	O14776	1098 aa	Known RBP	11.93	□□□□□ -0.5
MITF-205	ENST00000394348	MS4A1	P11836	297 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	LMOD3	Q0VAK6	560 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	NEUROD2	Q15784	382 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	NFE2L2	Q16236	605 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.93	□□□□□ -0.5
MITF-205	ENST00000394348	ZNF428	Q96B54	188 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	EMILIN1	Q9Y6C2	1016 aa		11.93	□□□□□ -0.5
MITF-205	ENST00000394348	RGPD8	O14715	1765 aa	Predicted RBP	11.92	□□□□□ -0.5
MITF-205	ENST00000394348	KDM2B	Q8NHM5	1336 aa		11.92	□□□□□ -0.5
MITF-205	ENST00000394348	KCNA6	P17658	529 aa		11.92	□□□□□ -0.5
MITF-205	ENST00000394348	C20orf194	Q5TEA3	1177 aa		11.92	□□□□□ -0.5
MITF-205	ENST00000394348	PEAK1	Q9H792	1746 aa		11.91	□□□□□ -0.5
MITF-205	ENST00000394348	PRKAR2A	P13861	404 aa	Known RBP	11.91	□□□□□ -0.5
MITF-205	ENST00000394348	PRKAR2B	P31323	418 aa		11.91	□□□□□ -0.5
MITF-205	ENST00000394348	RIPK4	P57078	832 aa		11.91	□□□□□ -0.5
MITF-205	ENST00000394348	SBNO1	A3KN83	1393 aa		11.91	□□□□□ -0.5
MITF-205	ENST00000394348	ARHGEF10	O15013	1369 aa		11.91	□□□□□ -0.5
MITF-205	ENST00000394348	BCAR3	O75815	825 aa		11.9	□□□□□ -0.5
MITF-205	ENST00000394348	ZRANB1	Q9UGI0	708 aa		11.9	□□□□□ -0.5
MITF-205	ENST00000394348	MARF1	Q9Y4F3	1742 aa	Known RBP	11.9	□□□□□ -0.5
MITF-205	ENST00000394348	FLT4	P35916	1363 aa		11.9	□□□□□ -0.5
MITF-205	ENST00000394348	PPM1G	O15355	546 aa	Predicted RBP	11.89	□□□□□ -0.51
MITF-205	ENST00000394348	NGDN	Q8NEJ9	315 aa	Known RBP	11.89	□□□□□ -0.51
MITF-205	ENST00000394348	CANX	P27824	592 aa	Known RBP	11.88	□□□□□ -0.51
MITF-205	ENST00000394348	BRPF1	P55201	1214 aa	Predicted RBP	11.88	□□□□□ -0.51
MITF-205	ENST00000394348	ALDH1L2	Q3SY69	923 aa		11.88	□□□□□ -0.51
MITF-205	ENST00000394348	CHADL	Q6NUI6	762 aa		11.88	□□□□□ -0.51
MITF-205	ENST00000394348	IFT57	Q9NWB7	429 aa		11.88	□□□□□ -0.51
MITF-205	ENST00000394348	RTL1	A6NKG5	1358 aa		11.88	□□□□□ -0.51
MITF-205	ENST00000394348	DLG5	Q8TDM6	1919 aa		11.88	□□□□□ -0.51
MITF-205	ENST00000394348	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.87	□□□□□ -0.51
MITF-205	ENST00000394348	EIF4A2	Q14240	407 aa	Known RBP	11.87	□□□□□ -0.51
MITF-205	ENST00000394348	RRS1	Q15050	365 aa	Known RBP	11.87	□□□□□ -0.51
MITF-205	ENST00000394348	KIF16B	Q96L93	1317 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	ZNF853	P0CG23	659 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	GNAI1	P63096	354 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	ZKSCAN2	Q63HK3	967 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	KDR	P35968	1356 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	KIF1A	Q12756	1690 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	NCOA3	Q9Y6Q9	1424 aa		11.86	□□□□□ -0.51
MITF-205	ENST00000394348	EXOSC9	Q06265	439 aa	Known RBP	11.85	□□□□□ -0.51
MITF-205	ENST00000394348	CLUAP1	Q96AJ1	413 aa		11.85	□□□□□ -0.51
MITF-205	ENST00000394348	HMOX1	P09601	288 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	FBLN1	P23142	703 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	PMFBP1	Q8TBY8	1022 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	PHACTR3	Q96KR7	559 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	PHF8	Q9UPP1	1060 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	MST1R	Q04912	1400 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	MAP3K19	Q56UN5	1328 aa		11.84	□□□□□ -0.51
MITF-205	ENST00000394348	NUTM2F	A1L443	756 aa		11.83	□□□□□ -0.52
MITF-205	ENST00000394348	IPO8	O15397	1037 aa	Known RBP	11.83	□□□□□ -0.52
MITF-205	ENST00000394348	HAP1	P54257	671 aa	Predicted RBP	11.83	□□□□□ -0.52
MITF-205	ENST00000394348	TSR2	Q969E8	191 aa	Known RBP	11.83	□□□□□ -0.52
MITF-205	ENST00000394348	CFAP44	Q96MT7	982 aa		11.83	□□□□□ -0.52
MITF-205	ENST00000394348	DCC	P43146	1447 aa		11.83	□□□□□ -0.52
MITF-205	ENST00000394348	IGSF1	Q8N6C5	1336 aa		11.83	□□□□□ -0.52
MITF-205	ENST00000394348	NFAT5	O94916	1531 aa		11.82	□□□□□ -0.52
MITF-205	ENST00000394348	MVP	Q14764	893 aa	Known RBP	11.82	□□□□□ -0.52
MITF-205	ENST00000394348	DZIP1L	Q8IYY4	767 aa	Known RBP	11.82	□□□□□ -0.52
MITF-205	ENST00000394348	SMC4	Q9NTJ3	1288 aa		11.82	□□□□□ -0.52
MITF-205	ENST00000394348	SULT6B1	Q6IMI4	303 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	ATF7IP	Q6VMQ6	1270 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	PANK1	Q8TE04	598 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	SSH1	Q8WYL5	1049 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	ARHGAP45	Q92619	1136 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	FRAT1	Q92837	279 aa	Predicted RBP	11.81	□□□□□ -0.52
MITF-205	ENST00000394348	LRRC37A3	O60309	1634 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	SLIT3	O75094	1523 aa		11.81	□□□□□ -0.52
MITF-205	ENST00000394348	NLRP6	P59044	892 aa		11.8	□□□□□ -0.52
MITF-205	ENST00000394348	HSP90AB2P	Q58FF8	381 aa		11.8	□□□□□ -0.52
MITF-205	ENST00000394348	FTSJ3	Q8IY81	847 aa	Known RBP	11.8	□□□□□ -0.52
MITF-205	ENST00000394348	CHMP4B	Q9H444	224 aa	Known RBP	11.8	□□□□□ -0.52
MITF-205	ENST00000394348	CREBZF	Q9NS37	354 aa		11.8	□□□□□ -0.52
MITF-205	ENST00000394348	DDX19B	Q9UMR2	479 aa		11.8	□□□□□ -0.52
MITF-205	ENST00000394348	COG6	Q9Y2V7	657 aa		11.8	□□□□□ -0.52
MITF-205	ENST00000394348	KIAA0232	Q92628	1395 aa		11.79	□□□□□ -0.52
MITF-205	ENST00000394348	HTATSF1	O43719	755 aa	Known RBP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms