RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PLEKHG5O94827 1062 aa25.81■■□□□ 1.72
CSNK1D-203ENST00000392334 TCP11L2Q8N4U5 519 aa25.81■■□□□ 1.72
CSNK1D-203ENST00000392334 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
CSNK1D-203ENST00000392334 USP31Q70CQ4 1352 aa25.78■■□□□ 1.72
CSNK1D-203ENST00000392334 NBR1Q14596 966 aa25.78■■□□□ 1.72
CSNK1D-203ENST00000392334 PXDNQ92626 1479 aa25.77■■□□□ 1.72
CSNK1D-203ENST00000392334 ZNF521Q96K83 1311 aa25.77■■□□□ 1.72
CSNK1D-203ENST00000392334 HMOX1P09601 288 aa25.76■■□□□ 1.72
CSNK1D-203ENST00000392334 CRBNQ96SW2 442 aa25.76■■□□□ 1.72
CSNK1D-203ENST00000392334 IL13P35225 146 aa25.75■■□□□ 1.71
CSNK1D-203ENST00000392334 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
CSNK1D-203ENST00000392334 HSP90AB2PQ58FF8 381 aa25.74■■□□□ 1.71
CSNK1D-203ENST00000392334 PLEKHF1Q96S99 279 aa25.74■■□□□ 1.71
CSNK1D-203ENST00000392334 SPINK5Q9NQ38 1064 aaPredicted RBP25.74■■□□□ 1.71
CSNK1D-203ENST00000392334 ROBO1Q9Y6N7 1651 aa25.74■■□□□ 1.71
CSNK1D-203ENST00000392334 PLIN1O60240 522 aa25.73■■□□□ 1.71
CSNK1D-203ENST00000392334 ALS2Q96Q42 1657 aa25.73■■□□□ 1.71
CSNK1D-203ENST00000392334 MAP3K19Q56UN5 1328 aa25.73■■□□□ 1.71
CSNK1D-203ENST00000392334 CDK12Q9NYV4 1490 aaPredicted RBP25.72■■□□□ 1.71
CSNK1D-203ENST00000392334 WWC1Q8IX03 1113 aa25.72■■□□□ 1.71
CSNK1D-203ENST00000392334 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
CSNK1D-203ENST00000392334 RTL5Q5HYW3 569 aaPredicted RBP25.71■■□□□ 1.71
CSNK1D-203ENST00000392334 DUSP27Q5VZP5 1158 aa25.71■■□□□ 1.71
CSNK1D-203ENST00000392334 PIP4K2BP78356 416 aa25.7■■□□□ 1.7
CSNK1D-203ENST00000392334 SOS2Q07890 1332 aaPredicted RBP25.7■■□□□ 1.7
CSNK1D-203ENST00000392334 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
CSNK1D-203ENST00000392334 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 NHSL1Q5SYE7 1610 aa25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 EIF4A2Q14240 407 aaKnown RBP25.69■■□□□ 1.7
CSNK1D-203ENST00000392334 TOM1O60784 492 aa25.68■■□□□ 1.7
CSNK1D-203ENST00000392334 AMPHP49418 695 aa25.68■■□□□ 1.7
CSNK1D-203ENST00000392334 IQSEC2Q5JU85 1478 aa25.68■■□□□ 1.7
CSNK1D-203ENST00000392334 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
CSNK1D-203ENST00000392334 RSPH6AQ9H0K4 717 aa25.68■■□□□ 1.7
CSNK1D-203ENST00000392334 UBAP1LF5GYI3 381 aa25.67■■□□□ 1.7
CSNK1D-203ENST00000392334 FCHSD2O94868 740 aa25.67■■□□□ 1.7
CSNK1D-203ENST00000392334 SLFN5Q08AF3 891 aa25.66■■□□□ 1.7
CSNK1D-203ENST00000392334 CERKQ8TCT0 537 aa25.66■■□□□ 1.7
CSNK1D-203ENST00000392334 CABLES1Q8TDN4 633 aa25.66■■□□□ 1.7
CSNK1D-203ENST00000392334 PEAK1Q9H792 1746 aa25.65■■□□□ 1.7
CSNK1D-203ENST00000392334 ZBTB7CA1YPR0 619 aa25.65■■□□□ 1.7
CSNK1D-203ENST00000392334 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
CSNK1D-203ENST00000392334 GCP02774 474 aa25.64■■□□□ 1.7
CSNK1D-203ENST00000392334 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
CSNK1D-203ENST00000392334 PHACTR3Q96KR7 559 aa25.64■■□□□ 1.7
CSNK1D-203ENST00000392334 MED1Q15648 1581 aaPredicted RBP25.64■■□□□ 1.69
CSNK1D-203ENST00000392334 CENPQQ7L2Z9 268 aaPredicted RBP25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 C20orf194Q5TEA3 1177 aa25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 AEBP1Q8IUX7 1158 aa25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 TRMT2AQ8IZ69 625 aaKnown RBP25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 USP35Q9P2H5 1018 aa25.63■■□□□ 1.69
CSNK1D-203ENST00000392334 USP19O94966 1318 aa25.62■■□□□ 1.69
CSNK1D-203ENST00000392334 NFAT5O94916 1531 aa25.62■■□□□ 1.69
CSNK1D-203ENST00000392334 PNNQ9H307 717 aaKnown RBP25.62■■□□□ 1.69
CSNK1D-203ENST00000392334 RIPK4P57078 832 aa25.61■■□□□ 1.69
CSNK1D-203ENST00000392334 DDRGK1Q96HY6 314 aa25.61■■□□□ 1.69
CSNK1D-203ENST00000392334 LTN1O94822 1766 aa25.61■■□□□ 1.69
CSNK1D-203ENST00000392334 SULT6B1Q6IMI4 303 aa25.61■■□□□ 1.69
CSNK1D-203ENST00000392334 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
CSNK1D-203ENST00000392334 SLIT3O75094 1523 aa25.6■■□□□ 1.69
CSNK1D-203ENST00000392334 FLT4P35916 1363 aa25.6■■□□□ 1.69
CSNK1D-203ENST00000392334 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
CSNK1D-203ENST00000392334 E9PSI1 815 aa25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 NEFMP07197 916 aa25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 LTV1Q96GA3 475 aaPredicted RBP25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 ARHGEF10O15013 1369 aa25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 HOXC9P31274 260 aa25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 TRIM35Q9UPQ4 493 aa25.59■■□□□ 1.69
CSNK1D-203ENST00000392334 ZC3H6P61129 1189 aaKnown RBP25.58■■□□□ 1.68
CSNK1D-203ENST00000392334 AHDC1Q5TGY3 1603 aaPredicted RBP25.57■■□□□ 1.68
CSNK1D-203ENST00000392334 CCDC27Q2M243 656 aa25.57■■□□□ 1.68
CSNK1D-203ENST00000392334 PHRF1Q9P1Y6 1649 aaKnown RBP25.56■■□□□ 1.68
CSNK1D-203ENST00000392334 CRYBG1Q9Y4K1 1723 aa25.55■■□□□ 1.68
CSNK1D-203ENST00000392334 WDR63Q8IWG1 891 aa25.54■■□□□ 1.68
CSNK1D-203ENST00000392334 ARHGEF25Q86VW2 580 aa25.54■■□□□ 1.68
CSNK1D-203ENST00000392334 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
CSNK1D-203ENST00000392334 LRRC59Q96AG4 307 aaKnown RBP25.53■■□□□ 1.68
CSNK1D-203ENST00000392334 EYA1Q99502 592 aa25.53■■□□□ 1.68
CSNK1D-203ENST00000392334 NFE2L2Q16236 605 aa25.51■■□□□ 1.67
CSNK1D-203ENST00000392334 THUMPD2Q9BTF0 503 aaKnown RBP25.5■■□□□ 1.67
CSNK1D-203ENST00000392334 TSR2Q969E8 191 aaKnown RBP25.49■■□□□ 1.67
CSNK1D-203ENST00000392334 COL16A1Q07092 1604 aaPredicted RBP25.49■■□□□ 1.67
CSNK1D-203ENST00000392334 IP6K1Q92551 441 aa25.49■■□□□ 1.67
CSNK1D-203ENST00000392334 AXIN2Q9Y2T1 843 aa25.49■■□□□ 1.67
CSNK1D-203ENST00000392334 KIF24Q5T7B8 1368 aa25.48■■□□□ 1.67
CSNK1D-203ENST00000392334 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 SKAP1Q86WV1 359 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 USHBP1Q8N6Y0 703 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 HAP1P54257 671 aaPredicted RBP25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 CHRNA2Q15822 529 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 RGPD5Q99666 1765 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
CSNK1D-203ENST00000392334 FAM83GA6ND36 823 aa25.46■■□□□ 1.67
CSNK1D-203ENST00000392334 KIAA0232Q92628 1395 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms