RNA–Protein interactions for RNA: ENST00000390364.3

TRBV10-1-201, Transcript of T cell receptor beta variable 10-1(gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRBV10-1, Length 412 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1-201ENST00000390364 SOX12O15370 315 aa11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 FMN2Q9NZ56 1722 aa11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 FLT4P35916 1363 aa11.62□□□□□ -0.55
TRBV10-1-201ENST00000390364 BCAR3O75815 825 aa11.61□□□□□ -0.55
TRBV10-1-201ENST00000390364 RARSP54136 660 aaKnown RBP11.61□□□□□ -0.55
TRBV10-1-201ENST00000390364 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
TRBV10-1-201ENST00000390364 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 PHACTR3Q96KR7 559 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
TRBV10-1-201ENST00000390364 EXOSC9Q06265 439 aaKnown RBP11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 ZKSCAN2Q63HK3 967 aa11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 CHMP4BQ9H444 224 aaKnown RBP11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
TRBV10-1-201ENST00000390364 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
TRBV10-1-201ENST00000390364 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
TRBV10-1-201ENST00000390364 CENPQQ7L2Z9 268 aaPredicted RBP11.58□□□□□ -0.56
TRBV10-1-201ENST00000390364 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
TRBV10-1-201ENST00000390364 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
TRBV10-1-201ENST00000390364 LRRC7Q96NW7 1537 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 KRT28Q7Z3Y7 464 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
TRBV10-1-201ENST00000390364 RTL1A6NKG5 1358 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 FOXO3O43524 673 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 HOXC9P31274 260 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 IP6K1Q92551 441 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 KIF16BQ96L93 1317 aa11.56□□□□□ -0.56
TRBV10-1-201ENST00000390364 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
TRBV10-1-201ENST00000390364 RGPD8O14715 1765 aaPredicted RBP11.54□□□□□ -0.56
TRBV10-1-201ENST00000390364 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
TRBV10-1-201ENST00000390364 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
TRBV10-1-201ENST00000390364 MSH6P52701 1360 aa11.54□□□□□ -0.56
TRBV10-1-201ENST00000390364 TMEM94Q12767 1356 aa11.54□□□□□ -0.56
TRBV10-1-201ENST00000390364 DCCP43146 1447 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 HSPA2P54652 639 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 EYA1Q99502 592 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
TRBV10-1-201ENST00000390364 C1orf167Q5SNV9 1468 aa11.52□□□□□ -0.56
TRBV10-1-201ENST00000390364 ZNF853P0CG23 659 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 BRPF1P55201 1214 aaPredicted RBP11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 SSH1Q8WYL5 1049 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 ARHGAP45Q92619 1136 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 COG6Q9Y2V7 657 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 KDRP35968 1356 aa11.52□□□□□ -0.57
TRBV10-1-201ENST00000390364 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 GCP02774 474 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 TWISTNBQ3B726 338 aaPredicted RBP11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 DDX19BQ9UMR2 479 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
TRBV10-1-201ENST00000390364 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
TRBV10-1-201ENST00000390364 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
TRBV10-1-201ENST00000390364 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
TRBV10-1-201ENST00000390364 BABAM1Q9NWV8 329 aa11.5□□□□□ -0.57
TRBV10-1-201ENST00000390364 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
TRBV10-1-201ENST00000390364 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 CHL1O00533 1208 aa11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 VAMP4O75379 141 aa11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
TRBV10-1-201ENST00000390364 FAM83GA6ND36 823 aa11.48□□□□□ -0.57
TRBV10-1-201ENST00000390364 XPCQ01831 940 aaPredicted RBP11.48□□□□□ -0.57
TRBV10-1-201ENST00000390364 AMOTQ4VCS5 1084 aa11.48□□□□□ -0.57
TRBV10-1-201ENST00000390364 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
TRBV10-1-201ENST00000390364 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
TRBV10-1-201ENST00000390364 SOS1Q07889 1333 aaPredicted RBP11.47□□□□□ -0.57
TRBV10-1-201ENST00000390364 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
TRBV10-1-201ENST00000390364 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms