RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 DYNC1I1O14576 645 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 SNX21Q969T3 373 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
RTF1-201ENST00000389629 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
RTF1-201ENST00000389629 UPF3BQ9BZI7 483 aaKnown RBP17.13■□□□□ 0.33
RTF1-201ENST00000389629 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
RTF1-201ENST00000389629 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
RTF1-201ENST00000389629 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
RTF1-201ENST00000389629 NOS1P29475 1434 aa17.13■□□□□ 0.33
RTF1-201ENST00000389629 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
RTF1-201ENST00000389629 CCDC66A2RUB6 948 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 TPM3P06753 285 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 RAB3GAP1Q15042 981 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 SMC5Q8IY18 1101 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
RTF1-201ENST00000389629 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
RTF1-201ENST00000389629 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
RTF1-201ENST00000389629 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 TEX35Q5T0J7 233 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 EIF2AK4Q9P2K8 1649 aaKnown RBP17.12■□□□□ 0.33
RTF1-201ENST00000389629 GNAI2P04899 355 aa17.12■□□□□ 0.33
RTF1-201ENST00000389629 EXOC6BQ9Y2D4 811 aa17.11■□□□□ 0.33
RTF1-201ENST00000389629 WDR33Q9C0J8 1336 aaKnown RBP17.11■□□□□ 0.33
RTF1-201ENST00000389629 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
RTF1-201ENST00000389629 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
RTF1-201ENST00000389629 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
RTF1-201ENST00000389629 FBLN1P23142 703 aa17.11■□□□□ 0.33
RTF1-201ENST00000389629 CGNQ9P2M7 1197 aaKnown RBP17.11■□□□□ 0.33
RTF1-201ENST00000389629 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
RTF1-201ENST00000389629 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
RTF1-201ENST00000389629 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
RTF1-201ENST00000389629 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
RTF1-201ENST00000389629 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
RTF1-201ENST00000389629 GNAI3P08754 354 aa17.1■□□□□ 0.33
RTF1-201ENST00000389629 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
RTF1-201ENST00000389629 LRRCC1Q9C099 1032 aa17.1■□□□□ 0.33
RTF1-201ENST00000389629 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
RTF1-201ENST00000389629 MAGI2Q86UL8 1455 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 IGSF3O75054 1194 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 CCDC192P0DO97 292 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
RTF1-201ENST00000389629 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
RTF1-201ENST00000389629 MNS1Q8NEH6 495 aa17.08■□□□□ 0.33
RTF1-201ENST00000389629 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.33
RTF1-201ENST00000389629 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.33
RTF1-201ENST00000389629 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
RTF1-201ENST00000389629 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
RTF1-201ENST00000389629 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
RTF1-201ENST00000389629 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
RTF1-201ENST00000389629 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
RTF1-201ENST00000389629 IL16Q14005 1332 aa17.07■□□□□ 0.32
RTF1-201ENST00000389629 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
RTF1-201ENST00000389629 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
RTF1-201ENST00000389629 MCM5P33992 734 aa17.06■□□□□ 0.32
RTF1-201ENST00000389629 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
RTF1-201ENST00000389629 ADCY5O95622 1261 aa17.06■□□□□ 0.32
RTF1-201ENST00000389629 TTC22Q5TAA0 569 aa17.06■□□□□ 0.32
RTF1-201ENST00000389629 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
RTF1-201ENST00000389629 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 MCM10Q7L590 875 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 GPS2Q13227 327 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 LRSAM1Q6UWE0 723 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
RTF1-201ENST00000389629 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
RTF1-201ENST00000389629 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
RTF1-201ENST00000389629 A0A0G2JS52 829 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
RTF1-201ENST00000389629 CAMK4Q16566 473 aa17.05■□□□□ 0.32
RTF1-201ENST00000389629 ARGLU1Q9NWB6 273 aaPredicted RBP17.05■□□□□ 0.32
RTF1-201ENST00000389629 FAM83GA6ND36 823 aa17.04■□□□□ 0.32
RTF1-201ENST00000389629 LARP6Q9BRS8 491 aaKnown RBP17.04■□□□□ 0.32
RTF1-201ENST00000389629 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
RTF1-201ENST00000389629 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
RTF1-201ENST00000389629 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
RTF1-201ENST00000389629 TEFQ10587 303 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 NSD2O96028 1365 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
RTF1-201ENST00000389629 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 FILIP1Q7Z7B0 1213 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 C16orf45Q96MC5 204 aaPredicted RBP17.03■□□□□ 0.32
RTF1-201ENST00000389629 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 F6X3S4 739 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 SDSP20132 328 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 USP19O94966 1318 aa17.03■□□□□ 0.32
RTF1-201ENST00000389629 FERMT3Q86UX7 667 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms