RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
SNPH-202ENST00000381873 HIP1O00291 1037 aa17.9■□□□□ 0.46
SNPH-202ENST00000381873 DNAJC2Q99543 621 aaKnown RBP17.9■□□□□ 0.46
SNPH-202ENST00000381873 SCAF11Q99590 1463 aaKnown RBP17.89■□□□□ 0.45
SNPH-202ENST00000381873 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.45
SNPH-202ENST00000381873 SDF4Q9BRK5 362 aa17.89■□□□□ 0.45
SNPH-202ENST00000381873 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
SNPH-202ENST00000381873 CNNM1Q9NRU3 951 aa17.89■□□□□ 0.45
SNPH-202ENST00000381873 TSR2Q969E8 191 aaKnown RBP17.88■□□□□ 0.45
SNPH-202ENST00000381873 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 TNNT3P45378 269 aaPredicted RBP17.88■□□□□ 0.45
SNPH-202ENST00000381873 HOMER1Q86YM7 354 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 ZNF592Q92610 1267 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
SNPH-202ENST00000381873 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
SNPH-202ENST00000381873 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
SNPH-202ENST00000381873 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
SNPH-202ENST00000381873 NEK4P51957 841 aa17.87■□□□□ 0.45
SNPH-202ENST00000381873 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
SNPH-202ENST00000381873 PDCP20941 246 aa17.86■□□□□ 0.45
SNPH-202ENST00000381873 GPS2Q13227 327 aa17.86■□□□□ 0.45
SNPH-202ENST00000381873 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
SNPH-202ENST00000381873 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
SNPH-202ENST00000381873 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
SNPH-202ENST00000381873 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
SNPH-202ENST00000381873 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
SNPH-202ENST00000381873 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
SNPH-202ENST00000381873 MCM2P49736 904 aa17.85■□□□□ 0.45
SNPH-202ENST00000381873 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
SNPH-202ENST00000381873 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
SNPH-202ENST00000381873 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
SNPH-202ENST00000381873 IDI1Q13907 227 aa17.84■□□□□ 0.45
SNPH-202ENST00000381873 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
SNPH-202ENST00000381873 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
SNPH-202ENST00000381873 TNRQ92752 1358 aa17.84■□□□□ 0.45
SNPH-202ENST00000381873 PTPRKQ15262 1439 aa17.83■□□□□ 0.45
SNPH-202ENST00000381873 NSD2O96028 1365 aa17.83■□□□□ 0.45
SNPH-202ENST00000381873 ATP2B1P20020 1258 aa17.83■□□□□ 0.45
SNPH-202ENST00000381873 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
SNPH-202ENST00000381873 OFD1O75665 1012 aa17.82■□□□□ 0.44
SNPH-202ENST00000381873 RRP12Q5JTH9 1297 aaKnown RBP17.82■□□□□ 0.44
SNPH-202ENST00000381873 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNPH-202ENST00000381873 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SNPH-202ENST00000381873 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
SNPH-202ENST00000381873 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 KCNH5Q8NCM2 988 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 BCAR3O75815 825 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 RABEP1Q15276 862 aa17.81■□□□□ 0.44
SNPH-202ENST00000381873 NOS1P29475 1434 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
SNPH-202ENST00000381873 FCHSD2O94868 740 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
SNPH-202ENST00000381873 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
SNPH-202ENST00000381873 TRAPPC8Q9Y2L5 1435 aa17.79■□□□□ 0.44
SNPH-202ENST00000381873 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
SNPH-202ENST00000381873 NACAP1Q9BZK3 213 aa17.79■□□□□ 0.44
SNPH-202ENST00000381873 NSD3Q9BZ95 1437 aa17.79■□□□□ 0.44
SNPH-202ENST00000381873 MYL6BP14649 208 aa17.79■□□□□ 0.44
SNPH-202ENST00000381873 SIL1Q9H173 461 aa17.79■□□□□ 0.44
SNPH-202ENST00000381873 ZC3H6P61129 1189 aaKnown RBP17.78■□□□□ 0.44
SNPH-202ENST00000381873 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
SNPH-202ENST00000381873 ZNF428Q96B54 188 aa17.78■□□□□ 0.44
SNPH-202ENST00000381873 UHRF1BP1LA0JNW5 1464 aa17.78■□□□□ 0.44
SNPH-202ENST00000381873 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
SNPH-202ENST00000381873 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
SNPH-202ENST00000381873 MBD3O95983 291 aa17.77■□□□□ 0.44
SNPH-202ENST00000381873 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
SNPH-202ENST00000381873 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
SNPH-202ENST00000381873 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
SNPH-202ENST00000381873 KDM4AO75164 1064 aa17.77■□□□□ 0.44
SNPH-202ENST00000381873 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.44
SNPH-202ENST00000381873 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.43
SNPH-202ENST00000381873 EPS15P42566 896 aa17.77■□□□□ 0.43
SNPH-202ENST00000381873 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
SNPH-202ENST00000381873 SRGAP3O43295 1099 aa17.76■□□□□ 0.43
SNPH-202ENST00000381873 TXLNAP40222 546 aa17.76■□□□□ 0.43
SNPH-202ENST00000381873 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
SNPH-202ENST00000381873 BTBD11A6QL63 1104 aa17.75■□□□□ 0.43
SNPH-202ENST00000381873 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
SNPH-202ENST00000381873 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
SNPH-202ENST00000381873 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNPH-202ENST00000381873 CYP46A1Q9Y6A2 500 aa17.75■□□□□ 0.43
SNPH-202ENST00000381873 PUS7Q96PZ0 661 aaKnown RBP17.75■□□□□ 0.43
SNPH-202ENST00000381873 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
SNPH-202ENST00000381873 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
SNPH-202ENST00000381873 NEO1Q92859 1461 aa17.74■□□□□ 0.43
SNPH-202ENST00000381873 WASLO00401 505 aaPredicted RBP17.74■□□□□ 0.43
SNPH-202ENST00000381873 STK38Q15208 465 aa17.74■□□□□ 0.43
SNPH-202ENST00000381873 NFKBIBQ15653 356 aa17.74■□□□□ 0.43
SNPH-202ENST00000381873 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms