RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 ST5P78524 1137 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 EAPPQ56P03 285 aaPredicted RBP6.88□□□□□ -1.31
GEN1-202ENST00000381254 ERVK-7P63135 1459 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 ABCC3O15438 1527 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 IL2RBP14784 551 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 RTCBQ9Y3I0 505 aaKnown RBP6.87□□□□□ -1.31
GEN1-202ENST00000381254 TMEM132EQ6IEE7 984 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 CCAR1Q8IX12 1150 aaKnown RBP6.87□□□□□ -1.31
GEN1-202ENST00000381254 BCL2L13Q9BXK5 485 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 ECE1P42892 770 aa6.87□□□□□ -1.31
GEN1-202ENST00000381254 EIF6P56537 245 aaKnown RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 CABP4P57796 275 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 PTMAP06454 111 aaKnown RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 C1QTNF8P60827 252 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 CLTCQ00610 1675 aaKnown RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 PLEKHO1Q53GL0 409 aaPredicted RBP6.86□□□□□ -1.31
GEN1-202ENST00000381254 CCDC7Q96M83 1385 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 TRAPPC3LQ5T215 181 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 CCDC61Q9Y6R9 512 aa6.86□□□□□ -1.31
GEN1-202ENST00000381254 MTERF4Q7Z6M4 381 aaKnown RBP6.85□□□□□ -1.31
GEN1-202ENST00000381254 FBXW7Q969H0 707 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 SAMD9LQ8IVG5 1584 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 KIAA2012Q0VF49 1180 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 LRRFIP1Q32MZ4 808 aaKnown RBP6.85□□□□□ -1.31
GEN1-202ENST00000381254 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 WAPLQ7Z5K2 1190 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 SIN3AQ96ST3 1273 aa6.85□□□□□ -1.31
GEN1-202ENST00000381254 SLC27A3Q5K4L6 730 aa6.84□□□□□ -1.31
GEN1-202ENST00000381254 L3MBTL2Q969R5 705 aa6.84□□□□□ -1.31
GEN1-202ENST00000381254 IQCA1LA6NCM1 817 aa6.84□□□□□ -1.31
GEN1-202ENST00000381254 LRRC7Q96NW7 1537 aa6.84□□□□□ -1.31
GEN1-202ENST00000381254 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.32
GEN1-202ENST00000381254 DALRD3Q5D0E6 543 aaKnown RBP6.84□□□□□ -1.32
GEN1-202ENST00000381254 TEFQ10587 303 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 DAPK1P53355 1430 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 MSNP26038 577 aaKnown RBP6.83□□□□□ -1.32
GEN1-202ENST00000381254 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
GEN1-202ENST00000381254 GPATCH3Q96I76 525 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 CENPJQ9HC77 1338 aaPredicted RBP6.83□□□□□ -1.32
GEN1-202ENST00000381254 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 H0YIN7 160 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 WASLO00401 505 aaPredicted RBP6.83□□□□□ -1.32
GEN1-202ENST00000381254 TPM3P06753 285 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 ADGRL3Q9HAR2 1447 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 TPM4P67936 248 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 FAM161AQ3B820 660 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 MAP7D2Q96T17 732 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 API5Q9BZZ5 524 aaKnown RBP6.83□□□□□ -1.32
GEN1-202ENST00000381254 DIP2CQ9Y2E4 1556 aa6.83□□□□□ -1.32
GEN1-202ENST00000381254 NLGN1Q8N2Q7 840 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 ADGBQ8N7X0 1667 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 NBPF15Q8N660 670 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 ZCRB1Q8TBF4 217 aaKnown RBP6.82□□□□□ -1.32
GEN1-202ENST00000381254 DCCP43146 1447 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 PNPLA6Q8IY17 1366 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 STARD3NLO95772 234 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 KIF22Q14807 665 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 MSL1Q68DK7 614 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 PDZRN3Q9UPQ7 1066 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
GEN1-202ENST00000381254 ST18O60284 1047 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 SYNMO15061 1565 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 TCIRG1Q13488 830 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 HSP90AB4PQ58FF6 505 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 KIF6Q6ZMV9 814 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 STK31Q9BXU1 1019 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 CDK12Q9NYV4 1490 aaPredicted RBP6.81□□□□□ -1.32
GEN1-202ENST00000381254 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
GEN1-202ENST00000381254 DDX19BQ9UMR2 479 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 SPATA31A3Q5VYP0 1347 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 ATP6V1AP38606 617 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 SLC15A2Q16348 729 aa6.81□□□□□ -1.32
GEN1-202ENST00000381254 FHDC1Q9C0D6 1143 aaPredicted RBP6.81□□□□□ -1.32
GEN1-202ENST00000381254 TXNRD1Q16881 649 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
GEN1-202ENST00000381254 TMEM106CQ9BVX2 250 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 KCNJ4P48050 445 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 PIM2Q9P1W9 311 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
GEN1-202ENST00000381254 PHLPP1O60346 1717 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 MCM2P49736 904 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 REC8O95072 547 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 OTUD7BQ6GQQ9 843 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 ACEP12821 1306 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 PDE3AQ14432 1141 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 ZNF408Q9H9D4 720 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 ADGRB2O60241 1585 aa6.8□□□□□ -1.32
GEN1-202ENST00000381254 GNPATO15228 680 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms