RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 USP54Q70EL1 1684 aa14.35□□□□□ -0.11
FAM239A-201ENST00000381108 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
FAM239A-201ENST00000381108 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
FAM239A-201ENST00000381108 NCOA3Q9Y6Q9 1424 aa14.35□□□□□ -0.11
FAM239A-201ENST00000381108 AMPHP49418 695 aa14.34□□□□□ -0.11
FAM239A-201ENST00000381108 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
FAM239A-201ENST00000381108 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
FAM239A-201ENST00000381108 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
FAM239A-201ENST00000381108 FCHSD2O94868 740 aa14.33□□□□□ -0.11
FAM239A-201ENST00000381108 SBNO1A3KN83 1393 aa14.33□□□□□ -0.12
FAM239A-201ENST00000381108 FLT4P35916 1363 aa14.33□□□□□ -0.12
FAM239A-201ENST00000381108 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
FAM239A-201ENST00000381108 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
FAM239A-201ENST00000381108 E9PSI1 815 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 NEFMP07197 916 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 KRT28Q7Z3Y7 464 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 LTN1O94822 1766 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
FAM239A-201ENST00000381108 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
FAM239A-201ENST00000381108 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
FAM239A-201ENST00000381108 RIPK4P57078 832 aa14.3□□□□□ -0.12
FAM239A-201ENST00000381108 SULT6B1Q6IMI4 303 aa14.3□□□□□ -0.12
FAM239A-201ENST00000381108 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
FAM239A-201ENST00000381108 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
FAM239A-201ENST00000381108 TRMT2AQ8IZ69 625 aaKnown RBP14.29□□□□□ -0.12
FAM239A-201ENST00000381108 NFAT5O94916 1531 aa14.29□□□□□ -0.12
FAM239A-201ENST00000381108 HOXC9P31274 260 aa14.29□□□□□ -0.12
FAM239A-201ENST00000381108 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
FAM239A-201ENST00000381108 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
FAM239A-201ENST00000381108 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
FAM239A-201ENST00000381108 RGPD1P0DJD0 1748 aa14.29□□□□□ -0.12
FAM239A-201ENST00000381108 WDR63Q8IWG1 891 aa14.27□□□□□ -0.12
FAM239A-201ENST00000381108 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.13
FAM239A-201ENST00000381108 ALS2Q96Q42 1657 aa14.27□□□□□ -0.13
FAM239A-201ENST00000381108 PLIN1O60240 522 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 DLG5Q8TDM6 1919 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 GCP02774 474 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
FAM239A-201ENST00000381108 SLIT3O75094 1523 aa14.25□□□□□ -0.13
FAM239A-201ENST00000381108 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
FAM239A-201ENST00000381108 TSR2Q969E8 191 aaKnown RBP14.24□□□□□ -0.13
FAM239A-201ENST00000381108 EYA1Q99502 592 aa14.24□□□□□ -0.13
FAM239A-201ENST00000381108 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
FAM239A-201ENST00000381108 RTL1A6NKG5 1358 aa14.24□□□□□ -0.13
FAM239A-201ENST00000381108 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
FAM239A-201ENST00000381108 THUMPD2Q9BTF0 503 aaKnown RBP14.24□□□□□ -0.13
FAM239A-201ENST00000381108 PXDNQ92626 1479 aa14.23□□□□□ -0.13
FAM239A-201ENST00000381108 MYH16Q9H6N6 1097 aa14.23□□□□□ -0.13
FAM239A-201ENST00000381108 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
FAM239A-201ENST00000381108 USP19O94966 1318 aa14.23□□□□□ -0.13
FAM239A-201ENST00000381108 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
FAM239A-201ENST00000381108 TNS3Q68CZ2 1445 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
FAM239A-201ENST00000381108 IP6K1Q92551 441 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 FANCIQ9NVI1 1328 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 FAM83GA6ND36 823 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 CABLES1Q8TDN4 633 aa14.22□□□□□ -0.13
FAM239A-201ENST00000381108 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
FAM239A-201ENST00000381108 ZC3H6P61129 1189 aaKnown RBP14.21□□□□□ -0.13
FAM239A-201ENST00000381108 BCAR3O75815 825 aa14.2□□□□□ -0.14
FAM239A-201ENST00000381108 DCTN1Q14203 1278 aa14.2□□□□□ -0.14
FAM239A-201ENST00000381108 KDRP35968 1356 aa14.2□□□□□ -0.14
FAM239A-201ENST00000381108 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
FAM239A-201ENST00000381108 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
FAM239A-201ENST00000381108 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
FAM239A-201ENST00000381108 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
FAM239A-201ENST00000381108 SPATA31A3Q5VYP0 1347 aa14.19□□□□□ -0.14
FAM239A-201ENST00000381108 C20orf194Q5TEA3 1177 aa14.19□□□□□ -0.14
FAM239A-201ENST00000381108 B4GALNT3Q6L9W6 998 aa14.19□□□□□ -0.14
FAM239A-201ENST00000381108 RGPD5Q99666 1765 aa14.18□□□□□ -0.14
FAM239A-201ENST00000381108 IL16Q14005 1332 aa14.18□□□□□ -0.14
FAM239A-201ENST00000381108 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
FAM239A-201ENST00000381108 EXOSC9Q06265 439 aaKnown RBP14.17□□□□□ -0.14
FAM239A-201ENST00000381108 EXOC6Q8TAG9 804 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
FAM239A-201ENST00000381108 BCL2L13Q9BXK5 485 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 MTHFSDQ2M296 383 aaKnown RBP14.17□□□□□ -0.14
FAM239A-201ENST00000381108 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 MCM10Q7L590 875 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
FAM239A-201ENST00000381108 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
FAM239A-201ENST00000381108 CRYBG1Q9Y4K1 1723 aa14.16□□□□□ -0.14
FAM239A-201ENST00000381108 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
FAM239A-201ENST00000381108 CALD1Q05682 793 aaKnown RBP14.15□□□□□ -0.14
FAM239A-201ENST00000381108 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
FAM239A-201ENST00000381108 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.15
FAM239A-201ENST00000381108 CRBNQ96SW2 442 aa14.15□□□□□ -0.15
FAM239A-201ENST00000381108 SOS2Q07890 1332 aaPredicted RBP14.14□□□□□ -0.15
FAM239A-201ENST00000381108 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
FAM239A-201ENST00000381108 FRAT1Q92837 279 aaPredicted RBP14.14□□□□□ -0.15
FAM239A-201ENST00000381108 NHSL1Q5SYE7 1610 aa14.13□□□□□ -0.15
FAM239A-201ENST00000381108 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
FAM239A-201ENST00000381108 GNAI1P63096 354 aa14.13□□□□□ -0.15
FAM239A-201ENST00000381108 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
FAM239A-201ENST00000381108 MBIPQ9NS73 344 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms