RNA–Protein interactions for RNA: ENST00000380569.6

GCOM1-202, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GCOM1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-202ENST00000380569 USP31Q70CQ4 1352 aa24.58■■□□□ 1.53
GCOM1-202ENST00000380569 TTC21AQ8NDW8 1320 aa24.58■■□□□ 1.53
GCOM1-202ENST00000380569 SMC4Q9NTJ3 1288 aa24.58■■□□□ 1.53
GCOM1-202ENST00000380569 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
GCOM1-202ENST00000380569 SSH1Q8WYL5 1049 aa24.57■■□□□ 1.52
GCOM1-202ENST00000380569 RGPD8O14715 1765 aaPredicted RBP24.56■■□□□ 1.52
GCOM1-202ENST00000380569 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
GCOM1-202ENST00000380569 KCNA6P17658 529 aa24.55■■□□□ 1.52
GCOM1-202ENST00000380569 PMFBP1Q8TBY8 1022 aa24.55■■□□□ 1.52
GCOM1-202ENST00000380569 MVPQ14764 893 aaKnown RBP24.54■■□□□ 1.52
GCOM1-202ENST00000380569 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
GCOM1-202ENST00000380569 ANKARQ7Z5J8 1434 aa24.54■■□□□ 1.52
GCOM1-202ENST00000380569 MYT1Q01538 1121 aa24.54■■□□□ 1.52
GCOM1-202ENST00000380569 EIF4A2Q14240 407 aaKnown RBP24.54■■□□□ 1.52
GCOM1-202ENST00000380569 IPO9Q96P70 1041 aaKnown RBP24.54■■□□□ 1.52
GCOM1-202ENST00000380569 DLG5Q8TDM6 1919 aa24.53■■□□□ 1.52
GCOM1-202ENST00000380569 LMOD3Q0VAK6 560 aa24.53■■□□□ 1.52
GCOM1-202ENST00000380569 ERICH6Q7L0X2 663 aa24.53■■□□□ 1.52
GCOM1-202ENST00000380569 NGDNQ8NEJ9 315 aaKnown RBP24.53■■□□□ 1.52
GCOM1-202ENST00000380569 ALDH1L2Q3SY69 923 aa24.52■■□□□ 1.52
GCOM1-202ENST00000380569 PEAK1Q9H792 1746 aa24.52■■□□□ 1.52
GCOM1-202ENST00000380569 FTSJ3Q8IY81 847 aaKnown RBP24.51■■□□□ 1.51
GCOM1-202ENST00000380569 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
GCOM1-202ENST00000380569 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
GCOM1-202ENST00000380569 GNAI1P63096 354 aa24.51■■□□□ 1.51
GCOM1-202ENST00000380569 PCDHB15Q9Y5E8 787 aa24.51■■□□□ 1.51
GCOM1-202ENST00000380569 ZNF853P0CG23 659 aa24.5■■□□□ 1.51
GCOM1-202ENST00000380569 TRIM27P14373 513 aa24.5■■□□□ 1.51
GCOM1-202ENST00000380569 ATF7IPQ6VMQ6 1270 aa24.5■■□□□ 1.51
GCOM1-202ENST00000380569 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
GCOM1-202ENST00000380569 LAS1LQ9Y4W2 734 aaKnown RBP24.49■■□□□ 1.51
GCOM1-202ENST00000380569 FMN2Q9NZ56 1722 aa24.49■■□□□ 1.51
GCOM1-202ENST00000380569 NOB1Q9ULX3 412 aaKnown RBP24.49■■□□□ 1.51
GCOM1-202ENST00000380569 KIF16BQ96L93 1317 aa24.48■■□□□ 1.51
GCOM1-202ENST00000380569 RGS3P49796 1198 aa24.48■■□□□ 1.51
GCOM1-202ENST00000380569 NOP58Q9Y2X3 529 aaKnown RBP24.48■■□□□ 1.51
GCOM1-202ENST00000380569 CHD2O14647 1828 aaKnown RBP24.48■■□□□ 1.51
GCOM1-202ENST00000380569 IPO8O15397 1037 aaKnown RBP24.47■■□□□ 1.51
GCOM1-202ENST00000380569 BRPF1P55201 1214 aaPredicted RBP24.47■■□□□ 1.51
GCOM1-202ENST00000380569 RGPD1P0DJD0 1748 aa24.47■■□□□ 1.51
GCOM1-202ENST00000380569 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
GCOM1-202ENST00000380569 HSP90AB2PQ58FF8 381 aa24.47■■□□□ 1.51
GCOM1-202ENST00000380569 SULT6B1Q6IMI4 303 aa24.47■■□□□ 1.51
GCOM1-202ENST00000380569 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
GCOM1-202ENST00000380569 NPHP4O75161 1426 aaPredicted RBP24.45■■□□□ 1.51
GCOM1-202ENST00000380569 PIK3C2AO00443 1686 aa24.45■■□□□ 1.5
GCOM1-202ENST00000380569 NPM2Q86SE8 214 aaKnown RBP24.45■■□□□ 1.5
GCOM1-202ENST00000380569 CFAP44Q96MT7 982 aa24.45■■□□□ 1.5
GCOM1-202ENST00000380569 MAP3K19Q56UN5 1328 aa24.44■■□□□ 1.5
GCOM1-202ENST00000380569 VAMP4O75379 141 aa24.44■■□□□ 1.5
GCOM1-202ENST00000380569 RWDD1Q9H446 243 aaPredicted RBP24.44■■□□□ 1.5
GCOM1-202ENST00000380569 MBIPQ9NS73 344 aa24.44■■□□□ 1.5
GCOM1-202ENST00000380569 DDX19BQ9UMR2 479 aa24.44■■□□□ 1.5
GCOM1-202ENST00000380569 C8orf34Q49A92 452 aa24.43■■□□□ 1.5
GCOM1-202ENST00000380569 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
GCOM1-202ENST00000380569 SOX12O15370 315 aa24.42■■□□□ 1.5
GCOM1-202ENST00000380569 FAM83GA6ND36 823 aa24.41■■□□□ 1.5
GCOM1-202ENST00000380569 FLT4P35916 1363 aa24.41■■□□□ 1.5
GCOM1-202ENST00000380569 ARHGEF10O15013 1369 aa24.4■■□□□ 1.5
GCOM1-202ENST00000380569 ZBTB47Q9UFB7 747 aaPredicted RBP24.4■■□□□ 1.5
GCOM1-202ENST00000380569 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
GCOM1-202ENST00000380569 ITPRIPQ8IWB1 547 aa24.4■■□□□ 1.5
GCOM1-202ENST00000380569 TSPYL6Q8N831 410 aa24.4■■□□□ 1.5
GCOM1-202ENST00000380569 TMEM57Q8N5G2 664 aa24.39■■□□□ 1.49
GCOM1-202ENST00000380569 USP54Q70EL1 1684 aa24.38■■□□□ 1.49
GCOM1-202ENST00000380569 MRPL50Q8N5N7 158 aaKnown RBP24.38■■□□□ 1.49
GCOM1-202ENST00000380569 NLRP6P59044 892 aa24.38■■□□□ 1.49
GCOM1-202ENST00000380569 DCTN1Q14203 1278 aa24.38■■□□□ 1.49
GCOM1-202ENST00000380569 ARHGAP45Q92619 1136 aa24.37■■□□□ 1.49
GCOM1-202ENST00000380569 TWISTNBQ3B726 338 aaPredicted RBP24.36■■□□□ 1.49
GCOM1-202ENST00000380569 STRCQ7RTU9 1775 aa24.36■■□□□ 1.49
GCOM1-202ENST00000380569 MARF1Q9Y4F3 1742 aaKnown RBP24.36■■□□□ 1.49
GCOM1-202ENST00000380569 AMPHP49418 695 aa24.35■■□□□ 1.49
GCOM1-202ENST00000380569 C8orf58Q8NAV2 365 aa24.35■■□□□ 1.49
GCOM1-202ENST00000380569 ZBTB40Q9NUA8 1239 aa24.35■■□□□ 1.49
GCOM1-202ENST00000380569 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
GCOM1-202ENST00000380569 KIF24Q5T7B8 1368 aa24.35■■□□□ 1.49
GCOM1-202ENST00000380569 HDAC1Q13547 482 aaPredicted RBP24.34■■□□□ 1.49
GCOM1-202ENST00000380569 PHF8Q9UPP1 1060 aa24.33■■□□□ 1.49
GCOM1-202ENST00000380569 KDRP35968 1356 aa24.33■■□□□ 1.49
GCOM1-202ENST00000380569 ELL2O00472 640 aaPredicted RBP24.33■■□□□ 1.48
GCOM1-202ENST00000380569 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
GCOM1-202ENST00000380569 ADGRL3Q9HAR2 1447 aa24.32■■□□□ 1.48
GCOM1-202ENST00000380569 IGSF1Q8N6C5 1336 aa24.32■■□□□ 1.48
GCOM1-202ENST00000380569 CHL1O00533 1208 aa24.31■■□□□ 1.48
GCOM1-202ENST00000380569 ABTB2Q8N961 1025 aa24.31■■□□□ 1.48
GCOM1-202ENST00000380569 EYA1Q99502 592 aa24.31■■□□□ 1.48
GCOM1-202ENST00000380569 NUTM2GQ5VZR2 741 aa24.29■■□□□ 1.48
GCOM1-202ENST00000380569 MCM10Q7L590 875 aa24.29■■□□□ 1.48
GCOM1-202ENST00000380569 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
GCOM1-202ENST00000380569 HOXC9P31274 260 aa24.28■■□□□ 1.48
GCOM1-202ENST00000380569 RBM33Q96EV2 1170 aaKnown RBP24.28■■□□□ 1.48
GCOM1-202ENST00000380569 CRB1P82279 1406 aa24.27■■□□□ 1.48
GCOM1-202ENST00000380569 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
GCOM1-202ENST00000380569 CHMP4BQ9H444 224 aaKnown RBP24.27■■□□□ 1.48
GCOM1-202ENST00000380569 KIAA0232Q92628 1395 aa24.26■■□□□ 1.47
GCOM1-202ENST00000380569 HAP1P54257 671 aaPredicted RBP24.26■■□□□ 1.47
GCOM1-202ENST00000380569 ABCC4O15439 1325 aa24.26■■□□□ 1.47
GCOM1-202ENST00000380569 SMC5Q8IY18 1101 aa24.25■■□□□ 1.47
GCOM1-202ENST00000380569 ZBTB7BO15156 539 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms