RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
PRNP-201ENST00000379440 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
PRNP-201ENST00000379440 ZKSCAN2Q63HK3 967 aa19.07■□□□□ 0.64
PRNP-201ENST00000379440 CEP170BQ9Y4F5 1589 aaPredicted RBP19.07■□□□□ 0.64
PRNP-201ENST00000379440 ANP32AP39687 249 aaKnown RBP19.07■□□□□ 0.64
PRNP-201ENST00000379440 RGS3P49796 1198 aa19.07■□□□□ 0.64
PRNP-201ENST00000379440 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
PRNP-201ENST00000379440 RIMS1Q86UR5 1692 aaKnown RBP19.06■□□□□ 0.64
PRNP-201ENST00000379440 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
PRNP-201ENST00000379440 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
PRNP-201ENST00000379440 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
PRNP-201ENST00000379440 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
PRNP-201ENST00000379440 RGPD8O14715 1765 aaPredicted RBP19.05■□□□□ 0.64
PRNP-201ENST00000379440 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
PRNP-201ENST00000379440 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
PRNP-201ENST00000379440 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
PRNP-201ENST00000379440 DZIP1LQ8IYY4 767 aaKnown RBP19.04■□□□□ 0.64
PRNP-201ENST00000379440 XRN1Q8IZH2 1706 aaKnown RBP19.03■□□□□ 0.64
PRNP-201ENST00000379440 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
PRNP-201ENST00000379440 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
PRNP-201ENST00000379440 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
PRNP-201ENST00000379440 TRIM27P14373 513 aa19.02■□□□□ 0.64
PRNP-201ENST00000379440 MVPQ14764 893 aaKnown RBP19.02■□□□□ 0.64
PRNP-201ENST00000379440 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.64
PRNP-201ENST00000379440 IPO9Q96P70 1041 aaKnown RBP19.02■□□□□ 0.63
PRNP-201ENST00000379440 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
PRNP-201ENST00000379440 USP31Q70CQ4 1352 aa19.01■□□□□ 0.63
PRNP-201ENST00000379440 DCTN1Q14203 1278 aa19■□□□□ 0.63
PRNP-201ENST00000379440 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
PRNP-201ENST00000379440 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
PRNP-201ENST00000379440 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
PRNP-201ENST00000379440 PEAK1Q9H792 1746 aa19■□□□□ 0.63
PRNP-201ENST00000379440 ATF7IPQ6VMQ6 1270 aa18.99■□□□□ 0.63
PRNP-201ENST00000379440 AAMPQ13685 434 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 TSPYL6Q8N831 410 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 MBIPQ9NS73 344 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 NOP58Q9Y2X3 529 aaKnown RBP18.98■□□□□ 0.63
PRNP-201ENST00000379440 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 NALCNQ8IZF0 1738 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 ELL2O00472 640 aaPredicted RBP18.98■□□□□ 0.63
PRNP-201ENST00000379440 GNAI1P63096 354 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
PRNP-201ENST00000379440 PIK3R4Q99570 1358 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 DLG5Q8TDM6 1919 aa18.98■□□□□ 0.63
PRNP-201ENST00000379440 ZNF853P0CG23 659 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 IFT57Q9NWB7 429 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 NUTM2GQ5VZR2 741 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 VAMP4O75379 141 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
PRNP-201ENST00000379440 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
PRNP-201ENST00000379440 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
PRNP-201ENST00000379440 FAM161AQ3B820 660 aa18.96■□□□□ 0.63
PRNP-201ENST00000379440 NLRP6P59044 892 aa18.95■□□□□ 0.62
PRNP-201ENST00000379440 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
PRNP-201ENST00000379440 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
PRNP-201ENST00000379440 KIF16BQ96L93 1317 aa18.94■□□□□ 0.62
PRNP-201ENST00000379440 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
PRNP-201ENST00000379440 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
PRNP-201ENST00000379440 IPO8O15397 1037 aaKnown RBP18.93■□□□□ 0.62
PRNP-201ENST00000379440 C8orf58Q8NAV2 365 aa18.93■□□□□ 0.62
PRNP-201ENST00000379440 RWDD1Q9H446 243 aaPredicted RBP18.93■□□□□ 0.62
PRNP-201ENST00000379440 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
PRNP-201ENST00000379440 AMPHP49418 695 aa18.92■□□□□ 0.62
PRNP-201ENST00000379440 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
PRNP-201ENST00000379440 ADAMTSL3P82987 1691 aa18.92■□□□□ 0.62
PRNP-201ENST00000379440 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
PRNP-201ENST00000379440 MCM10Q7L590 875 aa18.91■□□□□ 0.62
PRNP-201ENST00000379440 TWISTNBQ3B726 338 aaPredicted RBP18.91■□□□□ 0.62
PRNP-201ENST00000379440 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
PRNP-201ENST00000379440 SBNO1A3KN83 1393 aa18.91■□□□□ 0.62
PRNP-201ENST00000379440 CHD2O14647 1828 aaKnown RBP18.91■□□□□ 0.62
PRNP-201ENST00000379440 ABTB2Q8N961 1025 aa18.9■□□□□ 0.62
PRNP-201ENST00000379440 ZNF428Q96B54 188 aa18.9■□□□□ 0.62
PRNP-201ENST00000379440 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
PRNP-201ENST00000379440 FLT4P35916 1363 aa18.9■□□□□ 0.62
PRNP-201ENST00000379440 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
PRNP-201ENST00000379440 ZNF142P52746 1687 aaPredicted RBP18.9■□□□□ 0.62
PRNP-201ENST00000379440 BRPF1P55201 1214 aaPredicted RBP18.89■□□□□ 0.61
PRNP-201ENST00000379440 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
PRNP-201ENST00000379440 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
PRNP-201ENST00000379440 FOXO3O43524 673 aa18.88■□□□□ 0.61
PRNP-201ENST00000379440 EYA1Q99502 592 aa18.88■□□□□ 0.61
PRNP-201ENST00000379440 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
PRNP-201ENST00000379440 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
PRNP-201ENST00000379440 KRT24Q2M2I5 525 aa18.87■□□□□ 0.61
PRNP-201ENST00000379440 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
PRNP-201ENST00000379440 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
PRNP-201ENST00000379440 HOXC9P31274 260 aa18.85■□□□□ 0.61
PRNP-201ENST00000379440 CHL1O00533 1208 aa18.84■□□□□ 0.61
PRNP-201ENST00000379440 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
PRNP-201ENST00000379440 IL27Q8NEV9 243 aa18.84■□□□□ 0.61
PRNP-201ENST00000379440 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
PRNP-201ENST00000379440 MARF1Q9Y4F3 1742 aaKnown RBP18.83■□□□□ 0.61
PRNP-201ENST00000379440 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.61
PRNP-201ENST00000379440 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.61
PRNP-201ENST00000379440 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.61
PRNP-201ENST00000379440 LTV1Q96GA3 475 aaPredicted RBP18.83■□□□□ 0.61
PRNP-201ENST00000379440 RTN4Q9NQC3 1192 aaKnown RBP18.83■□□□□ 0.6
PRNP-201ENST00000379440 MIS18AQ9NYP9 233 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms