RNA–Protein interactions for RNA: ENST00000378535.4

KITLG-204, Transcript of KIT ligand, humanhuman

TSL 1 (best)

Gene KITLG, Length 5,191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KITLG-204ENST00000378535 R3HDM1Q15032 1099 aaKnown RBP3.54□□□□□ -1.84
KITLG-204ENST00000378535 GPR162Q16538 588 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 CRB1P82279 1406 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 NSD3Q9BZ95 1437 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 GRIN3BO60391 1043 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 DDX54Q8TDD1 881 aaKnown RBP3.54□□□□□ -1.84
KITLG-204ENST00000378535 SLC16A10Q8TF71 515 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 PXDNQ92626 1479 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 AATKQ6ZMQ8 1374 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 KCNQ2O43526 872 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
KITLG-204ENST00000378535 WDR17Q8IZU2 1322 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 PSDA5PKW4 1024 aaPredicted RBP3.54□□□□□ -1.84
KITLG-204ENST00000378535 SLC27A3Q5K4L6 730 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 ANKRD24Q8TF21 1146 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 AK7Q96M32 723 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 NUDCQ9Y266 331 aa3.54□□□□□ -1.84
KITLG-204ENST00000378535 KNDC1Q76NI1 1749 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 CPDO75976 1380 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 SSH2Q76I76 1423 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 PLEKHO1Q53GL0 409 aaPredicted RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 TFCP2L1Q9NZI6 479 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 ITSN1Q15811 1721 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 COL14A1Q05707 1796 aaKnown RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 YY1P25490 414 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 MAPK8IP2Q13387 824 aaPredicted RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 DEFB132Q7Z7B7 95 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 C16orf71Q8IYS4 520 aaPredicted RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 ZCRB1Q8TBF4 217 aaKnown RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 SLIT2O94813 1529 aa3.53□□□□□ -1.84
KITLG-204ENST00000378535 ONECUT3O60422 494 aaPredicted RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 LARP1Q6PKG0 1096 aaKnown RBP3.53□□□□□ -1.84
KITLG-204ENST00000378535 MORC1Q86VD1 984 aa3.53□□□□□ -1.85
KITLG-204ENST00000378535 SIN3AQ96ST3 1273 aa3.53□□□□□ -1.85
KITLG-204ENST00000378535 USP47Q96K76 1375 aa3.53□□□□□ -1.85
KITLG-204ENST00000378535 NBPF1Q3BBV0 1214 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 USP32Q8NFA0 1604 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 NALCNQ8IZF0 1738 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 FMN2Q9NZ56 1722 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 PLSCR1O15162 318 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 EZH2Q15910 746 aaKnown RBP3.52□□□□□ -1.85
KITLG-204ENST00000378535 IP6K1Q92551 441 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 TMOD3Q9NYL9 352 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 COL22A1Q8NFW1 1626 aaPredicted RBP3.52□□□□□ -1.85
KITLG-204ENST00000378535 BCL9LQ86UU0 1499 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 USP6P35125 1406 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 EDC4Q6P2E9 1401 aaKnown RBP3.52□□□□□ -1.85
KITLG-204ENST00000378535 PCDH11XQ9BZA7 1347 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 PCDH11YQ9BZA8 1340 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 PROM2Q8N271 834 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 MTFR1LQ9H019 292 aa3.52□□□□□ -1.85
KITLG-204ENST00000378535 USP19O94966 1318 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 AMOTQ4VCS5 1084 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 CCNL1Q9UK58 526 aaPredicted RBP3.51□□□□□ -1.85
KITLG-204ENST00000378535 NRXN3Q9Y4C0 1643 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 ARHGEF25Q86VW2 580 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 CHMP4AQ9BY43 222 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 XIRP1Q702N8 1843 aaKnown RBP3.51□□□□□ -1.85
KITLG-204ENST00000378535 PRR36Q9H6K5 1346 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 RTL1A6NKG5 1358 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 TTC5Q8N0Z6 440 aa3.51□□□□□ -1.85
KITLG-204ENST00000378535 A0A087WZG4 1122 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 TXNRD1Q16881 649 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 RTF1Q92541 710 aaKnown RBP3.5□□□□□ -1.85
KITLG-204ENST00000378535 ACSBG1Q96GR2 724 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 ARXQ96QS3 562 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 SBNO2Q9Y2G9 1366 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 ST20-MTHFSA0A0A6YYL1 179 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 CABP4P57796 275 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 SLC15A2Q16348 729 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 IFNL2Q8IZJ0 200 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 NWD2Q9ULI1 1742 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 KIF24Q5T7B8 1368 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 CCDC87Q9NVE4 849 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 CPSF1Q10570 1443 aaKnown RBP3.5□□□□□ -1.85
KITLG-204ENST00000378535 IFT172Q9UG01 1749 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 KIAA1210Q9ULL0 1709 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 FOXD4L1Q9NU39 408 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 PARP3Q9Y6F1 533 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 TRPM1Q7Z4N2 1603 aa3.5□□□□□ -1.85
KITLG-204ENST00000378535 NME9Q86XW9 330 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 SLC12A5Q9H2X9 1139 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 ATF5Q9Y2D1 282 aaPredicted RBP3.49□□□□□ -1.85
KITLG-204ENST00000378535 ZPR1O75312 459 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 CAMKK2Q96RR4 588 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 RBM42Q9BTD8 480 aaKnown RBP3.49□□□□□ -1.85
KITLG-204ENST00000378535 TEX13AQ9BXU3 409 aaPredicted RBP3.49□□□□□ -1.85
KITLG-204ENST00000378535 FLT4P35916 1363 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 ANKRD36BQ8N2N9 1353 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.49□□□□□ -1.85
KITLG-204ENST00000378535 RFC4P35249 363 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 RTCBQ9Y3I0 505 aaKnown RBP3.49□□□□□ -1.85
KITLG-204ENST00000378535 NSD2O96028 1365 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 USP31Q70CQ4 1352 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 FAM182BQ5T319 152 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 PDZRN3Q9UPQ7 1066 aa3.49□□□□□ -1.85
KITLG-204ENST00000378535 TRAPPC3LQ5T215 181 aa3.48□□□□□ -1.85
KITLG-204ENST00000378535 MPRIPQ6WCQ1 1025 aa3.48□□□□□ -1.85
KITLG-204ENST00000378535 GGNBP2Q9H3C7 697 aa3.48□□□□□ -1.85
KITLG-204ENST00000378535 RGPD1P0DJD0 1748 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms