RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TSPOAP1O95153 1857 aa13.49□□□□□ -0.25
ABCF1-202ENST00000376545 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
ABCF1-202ENST00000376545 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
ABCF1-202ENST00000376545 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
ABCF1-202ENST00000376545 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
ABCF1-202ENST00000376545 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
ABCF1-202ENST00000376545 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
ABCF1-202ENST00000376545 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
ABCF1-202ENST00000376545 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
ABCF1-202ENST00000376545 METP08581 1390 aa13.47□□□□□ -0.25
ABCF1-202ENST00000376545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
ABCF1-202ENST00000376545 FBLN1P23142 703 aa13.47□□□□□ -0.25
ABCF1-202ENST00000376545 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
ABCF1-202ENST00000376545 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
ABCF1-202ENST00000376545 ABCC4O15439 1325 aa13.47□□□□□ -0.25
ABCF1-202ENST00000376545 GNAI1P63096 354 aa13.46□□□□□ -0.25
ABCF1-202ENST00000376545 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.25
ABCF1-202ENST00000376545 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.26
ABCF1-202ENST00000376545 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.26
ABCF1-202ENST00000376545 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.26
ABCF1-202ENST00000376545 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.26
ABCF1-202ENST00000376545 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.26
ABCF1-202ENST00000376545 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.26
ABCF1-202ENST00000376545 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
ABCF1-202ENST00000376545 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
ABCF1-202ENST00000376545 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
ABCF1-202ENST00000376545 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
ABCF1-202ENST00000376545 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 DDIT3P35638 169 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 NME9Q86XW9 330 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
ABCF1-202ENST00000376545 HMOX1P09601 288 aa13.43□□□□□ -0.26
ABCF1-202ENST00000376545 SNX21Q969T3 373 aa13.43□□□□□ -0.26
ABCF1-202ENST00000376545 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
ABCF1-202ENST00000376545 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
ABCF1-202ENST00000376545 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
ABCF1-202ENST00000376545 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
ABCF1-202ENST00000376545 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
ABCF1-202ENST00000376545 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
ABCF1-202ENST00000376545 SIRT2Q8IXJ6 389 aa13.42□□□□□ -0.26
ABCF1-202ENST00000376545 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
ABCF1-202ENST00000376545 THUMPD2Q9BTF0 503 aaKnown RBP13.42□□□□□ -0.26
ABCF1-202ENST00000376545 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
ABCF1-202ENST00000376545 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
ABCF1-202ENST00000376545 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
ABCF1-202ENST00000376545 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
ABCF1-202ENST00000376545 COG3Q96JB2 828 aa13.4□□□□□ -0.26
ABCF1-202ENST00000376545 LNPKQ9C0E8 428 aa13.4□□□□□ -0.26
ABCF1-202ENST00000376545 TWISTNBQ3B726 338 aaPredicted RBP13.39□□□□□ -0.27
ABCF1-202ENST00000376545 C8orf58Q8NAV2 365 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 MCM4P33991 863 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 KIF2CQ99661 725 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
ABCF1-202ENST00000376545 RGS12O14924 1447 aa13.38□□□□□ -0.27
ABCF1-202ENST00000376545 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
ABCF1-202ENST00000376545 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
ABCF1-202ENST00000376545 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
ABCF1-202ENST00000376545 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
ABCF1-202ENST00000376545 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
ABCF1-202ENST00000376545 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
ABCF1-202ENST00000376545 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
ABCF1-202ENST00000376545 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
ABCF1-202ENST00000376545 SSH2Q76I76 1423 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 KIAA0232Q92628 1395 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
ABCF1-202ENST00000376545 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 HSCBQ8IWL3 235 aa13.36□□□□□ -0.27
ABCF1-202ENST00000376545 PKNOX2Q96KN3 472 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 FAM83GA6ND36 823 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 L1TD1Q5T7N2 865 aaKnown RBP13.35□□□□□ -0.27
ABCF1-202ENST00000376545 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 CHL1O00533 1208 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
ABCF1-202ENST00000376545 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
ABCF1-202ENST00000376545 TNRQ92752 1358 aa13.34□□□□□ -0.27
ABCF1-202ENST00000376545 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
ABCF1-202ENST00000376545 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
ABCF1-202ENST00000376545 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
ABCF1-202ENST00000376545 USP6P35125 1406 aa13.34□□□□□ -0.27
ABCF1-202ENST00000376545 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.27
ABCF1-202ENST00000376545 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
ABCF1-202ENST00000376545 CRB1P82279 1406 aa13.33□□□□□ -0.28
ABCF1-202ENST00000376545 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
ABCF1-202ENST00000376545 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.28
ABCF1-202ENST00000376545 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
ABCF1-202ENST00000376545 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
ABCF1-202ENST00000376545 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
ABCF1-202ENST00000376545 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
ABCF1-202ENST00000376545 MLECQ14165 292 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms