RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
MSH5-202ENST00000375740 AAMPQ13685 434 aa17.87■□□□□ 0.45
MSH5-202ENST00000375740 NFE2L2Q16236 605 aa17.87■□□□□ 0.45
MSH5-202ENST00000375740 SMC4Q9NTJ3 1288 aa17.87■□□□□ 0.45
MSH5-202ENST00000375740 TTC21BQ7Z4L5 1316 aa17.87■□□□□ 0.45
MSH5-202ENST00000375740 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
MSH5-202ENST00000375740 SSH1Q8WYL5 1049 aa17.87■□□□□ 0.45
MSH5-202ENST00000375740 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
MSH5-202ENST00000375740 DZIP1LQ8IYY4 767 aaKnown RBP17.85■□□□□ 0.45
MSH5-202ENST00000375740 MVPQ14764 893 aaKnown RBP17.85■□□□□ 0.45
MSH5-202ENST00000375740 FAM161AQ3B820 660 aa17.85■□□□□ 0.45
MSH5-202ENST00000375740 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
MSH5-202ENST00000375740 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
MSH5-202ENST00000375740 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
MSH5-202ENST00000375740 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
MSH5-202ENST00000375740 C8orf34Q49A92 452 aa17.83■□□□□ 0.44
MSH5-202ENST00000375740 NOB1Q9ULX3 412 aaKnown RBP17.83■□□□□ 0.44
MSH5-202ENST00000375740 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
MSH5-202ENST00000375740 USP6P35125 1406 aa17.82■□□□□ 0.44
MSH5-202ENST00000375740 TRIM27P14373 513 aa17.82■□□□□ 0.44
MSH5-202ENST00000375740 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
MSH5-202ENST00000375740 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
MSH5-202ENST00000375740 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
MSH5-202ENST00000375740 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
MSH5-202ENST00000375740 PTCH1Q13635 1447 aa17.79■□□□□ 0.44
MSH5-202ENST00000375740 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
MSH5-202ENST00000375740 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
MSH5-202ENST00000375740 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
MSH5-202ENST00000375740 DDRGK1Q96HY6 314 aa17.78■□□□□ 0.44
MSH5-202ENST00000375740 FRAT2O75474 233 aaPredicted RBP17.77■□□□□ 0.44
MSH5-202ENST00000375740 GNAI1P63096 354 aa17.77■□□□□ 0.44
MSH5-202ENST00000375740 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
MSH5-202ENST00000375740 SSH2Q76I76 1423 aa17.77■□□□□ 0.44
MSH5-202ENST00000375740 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
MSH5-202ENST00000375740 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
MSH5-202ENST00000375740 ZNF853P0CG23 659 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
MSH5-202ENST00000375740 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 SOX12O15370 315 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 VAMP4O75379 141 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 SULT6B1Q6IMI4 303 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
MSH5-202ENST00000375740 FAM83GA6ND36 823 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
MSH5-202ENST00000375740 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 DDX19BQ9UMR2 479 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 KCNA6P17658 529 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
MSH5-202ENST00000375740 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
MSH5-202ENST00000375740 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
MSH5-202ENST00000375740 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
MSH5-202ENST00000375740 NALCNQ8IZF0 1738 aa17.73■□□□□ 0.43
MSH5-202ENST00000375740 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
MSH5-202ENST00000375740 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
MSH5-202ENST00000375740 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
MSH5-202ENST00000375740 BRPF1P55201 1214 aaPredicted RBP17.73■□□□□ 0.43
MSH5-202ENST00000375740 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
MSH5-202ENST00000375740 CEP170BQ9Y4F5 1589 aaPredicted RBP17.71■□□□□ 0.43
MSH5-202ENST00000375740 MAP3K19Q56UN5 1328 aa17.7■□□□□ 0.42
MSH5-202ENST00000375740 ZBTB40Q9NUA8 1239 aa17.7■□□□□ 0.42
MSH5-202ENST00000375740 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
MSH5-202ENST00000375740 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
MSH5-202ENST00000375740 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
MSH5-202ENST00000375740 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
MSH5-202ENST00000375740 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
MSH5-202ENST00000375740 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
MSH5-202ENST00000375740 FAM43AQ8N2R8 423 aa17.68■□□□□ 0.42
MSH5-202ENST00000375740 ARHGAP45Q92619 1136 aa17.67■□□□□ 0.42
MSH5-202ENST00000375740 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
MSH5-202ENST00000375740 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
MSH5-202ENST00000375740 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
MSH5-202ENST00000375740 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
MSH5-202ENST00000375740 NLRP6P59044 892 aa17.66■□□□□ 0.42
MSH5-202ENST00000375740 MCM10Q7L590 875 aa17.66■□□□□ 0.42
MSH5-202ENST00000375740 SEC24BO95487 1268 aa17.65■□□□□ 0.42
MSH5-202ENST00000375740 SBNO1A3KN83 1393 aa17.65■□□□□ 0.42
MSH5-202ENST00000375740 AMPHP49418 695 aa17.65■□□□□ 0.42
MSH5-202ENST00000375740 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
MSH5-202ENST00000375740 NUTM2GQ5VZR2 741 aa17.65■□□□□ 0.42
MSH5-202ENST00000375740 FLT4P35916 1363 aa17.64■□□□□ 0.41
MSH5-202ENST00000375740 FMN2Q9NZ56 1722 aa17.64■□□□□ 0.41
MSH5-202ENST00000375740 RRAGDQ9NQL2 400 aaPredicted RBP17.64■□□□□ 0.41
MSH5-202ENST00000375740 CHL1O00533 1208 aa17.63■□□□□ 0.41
MSH5-202ENST00000375740 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
MSH5-202ENST00000375740 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
MSH5-202ENST00000375740 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
MSH5-202ENST00000375740 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
MSH5-202ENST00000375740 USP19O94966 1318 aa17.63■□□□□ 0.41
MSH5-202ENST00000375740 EYA1Q99502 592 aa17.62■□□□□ 0.41
MSH5-202ENST00000375740 CHD2O14647 1828 aaKnown RBP17.62■□□□□ 0.41
MSH5-202ENST00000375740 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
MSH5-202ENST00000375740 FOXO3O43524 673 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms