RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
HMGCL-202ENST00000374487 FYB1O15117 783 aa15.7■□□□□ 0.1
HMGCL-202ENST00000374487 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
HMGCL-202ENST00000374487 MSH5O43196 834 aa15.7■□□□□ 0.1
HMGCL-202ENST00000374487 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
HMGCL-202ENST00000374487 ITSN1Q15811 1721 aa15.69■□□□□ 0.1
HMGCL-202ENST00000374487 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
HMGCL-202ENST00000374487 BCAR3O75815 825 aa15.68■□□□□ 0.1
HMGCL-202ENST00000374487 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
HMGCL-202ENST00000374487 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
HMGCL-202ENST00000374487 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
HMGCL-202ENST00000374487 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
HMGCL-202ENST00000374487 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
HMGCL-202ENST00000374487 COL22A1Q8NFW1 1626 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-202ENST00000374487 AFF2P51816 1311 aa15.66■□□□□ 0.1
HMGCL-202ENST00000374487 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
HMGCL-202ENST00000374487 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
HMGCL-202ENST00000374487 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
HMGCL-202ENST00000374487 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
HMGCL-202ENST00000374487 ALS2Q96Q42 1657 aa15.65■□□□□ 0.1
HMGCL-202ENST00000374487 USP6P35125 1406 aa15.65■□□□□ 0.1
HMGCL-202ENST00000374487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.65■□□□□ 0.1
HMGCL-202ENST00000374487 MS4A1P11836 297 aa15.64■□□□□ 0.09
HMGCL-202ENST00000374487 ANP32AP39687 249 aaKnown RBP15.63■□□□□ 0.09
HMGCL-202ENST00000374487 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
HMGCL-202ENST00000374487 CENPQQ7L2Z9 268 aaPredicted RBP15.63■□□□□ 0.09
HMGCL-202ENST00000374487 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
HMGCL-202ENST00000374487 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
HMGCL-202ENST00000374487 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
HMGCL-202ENST00000374487 FAM83GA6ND36 823 aa15.62■□□□□ 0.09
HMGCL-202ENST00000374487 SSH2Q76I76 1423 aa15.62■□□□□ 0.09
HMGCL-202ENST00000374487 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
HMGCL-202ENST00000374487 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
HMGCL-202ENST00000374487 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
HMGCL-202ENST00000374487 SOX12O15370 315 aa15.61■□□□□ 0.09
HMGCL-202ENST00000374487 ZC3H6P61129 1189 aaKnown RBP15.61■□□□□ 0.09
HMGCL-202ENST00000374487 PDE3AQ14432 1141 aa15.61■□□□□ 0.09
HMGCL-202ENST00000374487 PDE4AP27815 886 aa15.6■□□□□ 0.09
HMGCL-202ENST00000374487 CHRNA2Q15822 529 aa15.6■□□□□ 0.09
HMGCL-202ENST00000374487 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
HMGCL-202ENST00000374487 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
HMGCL-202ENST00000374487 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
HMGCL-202ENST00000374487 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
HMGCL-202ENST00000374487 NLRP6P59044 892 aa15.6■□□□□ 0.09
HMGCL-202ENST00000374487 NME9Q86XW9 330 aa15.6■□□□□ 0.09
HMGCL-202ENST00000374487 ABCA3Q99758 1704 aa15.59■□□□□ 0.09
HMGCL-202ENST00000374487 USP21Q9UK80 565 aa15.59■□□□□ 0.09
HMGCL-202ENST00000374487 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
HMGCL-202ENST00000374487 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
HMGCL-202ENST00000374487 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-202ENST00000374487 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
HMGCL-202ENST00000374487 AKAP12Q02952 1782 aa15.58■□□□□ 0.08
HMGCL-202ENST00000374487 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
HMGCL-202ENST00000374487 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
HMGCL-202ENST00000374487 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-202ENST00000374487 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
HMGCL-202ENST00000374487 BACH2Q9BYV9 841 aa15.57■□□□□ 0.08
HMGCL-202ENST00000374487 PIK3C2AO00443 1686 aa15.57■□□□□ 0.08
HMGCL-202ENST00000374487 CRYBG1Q9Y4K1 1723 aa15.57■□□□□ 0.08
HMGCL-202ENST00000374487 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-202ENST00000374487 FBLN1P23142 703 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 KIAA0232Q92628 1395 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 GCP02774 474 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
HMGCL-202ENST00000374487 PANK1Q8TE04 598 aa15.56■□□□□ 0.08
HMGCL-202ENST00000374487 NEFMP07197 916 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
HMGCL-202ENST00000374487 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 NRKQ7Z2Y5 1582 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 USP19O94966 1318 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 RIPK4P57078 832 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 EDC4Q6P2E9 1401 aaKnown RBP15.55■□□□□ 0.08
HMGCL-202ENST00000374487 BTG4Q9NY30 223 aa15.55■□□□□ 0.08
HMGCL-202ENST00000374487 MON2Q7Z3U7 1717 aa15.54■□□□□ 0.08
HMGCL-202ENST00000374487 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
HMGCL-202ENST00000374487 FCHSD2O94868 740 aa15.54■□□□□ 0.08
HMGCL-202ENST00000374487 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
HMGCL-202ENST00000374487 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
HMGCL-202ENST00000374487 PRDM11Q9NQV5 511 aa15.54■□□□□ 0.08
HMGCL-202ENST00000374487 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
HMGCL-202ENST00000374487 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
HMGCL-202ENST00000374487 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
HMGCL-202ENST00000374487 SLIT2O94813 1529 aa15.53■□□□□ 0.08
HMGCL-202ENST00000374487 KIF20BQ96Q89 1820 aa15.53■□□□□ 0.08
HMGCL-202ENST00000374487 CLUAP1Q96AJ1 413 aa15.53■□□□□ 0.08
HMGCL-202ENST00000374487 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.08
HMGCL-202ENST00000374487 COG3Q96JB2 828 aa15.52■□□□□ 0.08
HMGCL-202ENST00000374487 CT47B1P0C2W7 299 aaPredicted RBP15.52■□□□□ 0.07
HMGCL-202ENST00000374487 RXRBP28702 533 aa15.52■□□□□ 0.07
HMGCL-202ENST00000374487 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.07
HMGCL-202ENST00000374487 TTC21AQ8NDW8 1320 aa15.51■□□□□ 0.07
HMGCL-202ENST00000374487 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-202ENST00000374487 STRN4Q9NRL3 753 aa15.51■□□□□ 0.07
HMGCL-202ENST00000374487 IL16Q14005 1332 aa15.5■□□□□ 0.07
HMGCL-202ENST00000374487 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
HMGCL-202ENST00000374487 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
HMGCL-202ENST00000374487 PLCH1Q4KWH8 1693 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms