RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 DNTTIP2Q5QJE6 756 aaKnown RBP9.62□□□□□ -0.87
HERC4-202ENST00000373700 PTPRTO14522 1441 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 KDM5CP41229 1560 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 FAM177BA6PVY3 158 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 ANO2Q9NQ90 1003 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 DDX49Q9Y6V7 483 aaKnown RBP9.61□□□□□ -0.87
HERC4-202ENST00000373700 MLH3Q9UHC1 1453 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 EIF2AK4Q9P2K8 1649 aaKnown RBP9.61□□□□□ -0.87
HERC4-202ENST00000373700 BCORL1Q5H9F3 1711 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 CHMP5Q9NZZ3 219 aa9.61□□□□□ -0.87
HERC4-202ENST00000373700 KDM5DQ9BY66 1539 aa9.6□□□□□ -0.87
HERC4-202ENST00000373700 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
HERC4-202ENST00000373700 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
HERC4-202ENST00000373700 C8orf58Q8NAV2 365 aa9.6□□□□□ -0.87
HERC4-202ENST00000373700 ST18O60284 1047 aa9.6□□□□□ -0.87
HERC4-202ENST00000373700 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 RIC3Q7Z5B4 369 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 SEC24BO95487 1268 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 GNAT3A8MTJ3 354 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 TAF7LQ5H9L4 462 aa9.59□□□□□ -0.87
HERC4-202ENST00000373700 ERVK-7P63135 1459 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 PIP4K2AP48426 406 aaPredicted RBP9.58□□□□□ -0.88
HERC4-202ENST00000373700 BTBD11A6QL63 1104 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 SMARCA5O60264 1052 aaPredicted RBP9.58□□□□□ -0.88
HERC4-202ENST00000373700 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
HERC4-202ENST00000373700 TRPM2O94759 1503 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 TMEM2Q9UHN6 1383 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 GOLGA6L4A6NEF3 574 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 UBTFL1P0CB47 393 aaPredicted RBP9.58□□□□□ -0.88
HERC4-202ENST00000373700 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 EXOC6BQ9Y2D4 811 aa9.58□□□□□ -0.88
HERC4-202ENST00000373700 CLTCL1P53675 1640 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 SURF6O75683 361 aaKnown RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 GORABQ5T7V8 394 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 AAMPQ13685 434 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 EYA1Q99502 592 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 SIL1Q9H173 461 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 POLR3AO14802 1390 aaPredicted RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 MTHFSDQ2M296 383 aaKnown RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
HERC4-202ENST00000373700 ARID3AQ99856 593 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
HERC4-202ENST00000373700 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
HERC4-202ENST00000373700 JARID2Q92833 1246 aaPredicted RBP9.56□□□□□ -0.88
HERC4-202ENST00000373700 CDC45O75419 566 aa9.56□□□□□ -0.88
HERC4-202ENST00000373700 ABCC3O15438 1527 aa9.56□□□□□ -0.88
HERC4-202ENST00000373700 CROCC2H7BZ55 1655 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 REC8O95072 547 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 SLC39A6Q13433 755 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 TRAK2O60296 914 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
HERC4-202ENST00000373700 MCTP1Q6DN14 999 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 NSD2O96028 1365 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 MSNP26038 577 aaKnown RBP9.55□□□□□ -0.88
HERC4-202ENST00000373700 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
HERC4-202ENST00000373700 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 TRIM35Q9UPQ4 493 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
HERC4-202ENST00000373700 CT47B1P0C2W7 299 aaPredicted RBP9.54□□□□□ -0.88
HERC4-202ENST00000373700 CABP4P57796 275 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 TSHZ3Q63HK5 1081 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 TBC1D2Q9BYX2 928 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 PIK3C2GO75747 1445 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 NEK4P51957 841 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 GCC1Q96CN9 775 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 SHROOM2Q13796 1616 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 IQGAP3Q86VI3 1631 aa9.54□□□□□ -0.88
HERC4-202ENST00000373700 GCP02774 474 aa9.53□□□□□ -0.88
HERC4-202ENST00000373700 EFCAB6Q5THR3 1501 aa9.53□□□□□ -0.88
HERC4-202ENST00000373700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
HERC4-202ENST00000373700 TAF7Q15545 349 aaPredicted RBP9.53□□□□□ -0.88
HERC4-202ENST00000373700 DIAPH3Q9NSV4 1193 aa9.53□□□□□ -0.88
HERC4-202ENST00000373700 IL13P35225 146 aa9.53□□□□□ -0.88
HERC4-202ENST00000373700 E9PCH4 1651 aa9.52□□□□□ -0.88
HERC4-202ENST00000373700 NINLQ9Y2I6 1382 aa9.52□□□□□ -0.88
HERC4-202ENST00000373700 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.88
HERC4-202ENST00000373700 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.89
HERC4-202ENST00000373700 ZRSR1Q15695 479 aaKnown RBP9.52□□□□□ -0.89
HERC4-202ENST00000373700 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
HERC4-202ENST00000373700 GNAI2P04899 355 aa9.52□□□□□ -0.89
HERC4-202ENST00000373700 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
HERC4-202ENST00000373700 GPATCH3Q96I76 525 aa9.52□□□□□ -0.89
HERC4-202ENST00000373700 ABCC11Q96J66 1382 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms