RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 FMN2Q9NZ56 1722 aa25.56■■□□□ 1.68
LHX3-202ENST00000371748 TTC21AQ8NDW8 1320 aa25.56■■□□□ 1.68
LHX3-202ENST00000371748 ANP32AP39687 249 aaKnown RBP25.55■■□□□ 1.68
LHX3-202ENST00000371748 CT47B1P0C2W7 299 aaPredicted RBP25.55■■□□□ 1.68
LHX3-202ENST00000371748 DLG5Q8TDM6 1919 aa25.55■■□□□ 1.68
LHX3-202ENST00000371748 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
LHX3-202ENST00000371748 RLBP1P12271 317 aa25.54■■□□□ 1.68
LHX3-202ENST00000371748 EIF4A2Q14240 407 aaKnown RBP25.54■■□□□ 1.68
LHX3-202ENST00000371748 ANKARQ7Z5J8 1434 aa25.53■■□□□ 1.68
LHX3-202ENST00000371748 NBR1Q14596 966 aa25.53■■□□□ 1.68
LHX3-202ENST00000371748 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
LHX3-202ENST00000371748 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
LHX3-202ENST00000371748 CLUAP1Q96AJ1 413 aa25.53■■□□□ 1.68
LHX3-202ENST00000371748 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
LHX3-202ENST00000371748 HSP90AB2PQ58FF8 381 aa25.52■■□□□ 1.68
LHX3-202ENST00000371748 PIK3C2AO00443 1686 aa25.51■■□□□ 1.67
LHX3-202ENST00000371748 SMC4Q9NTJ3 1288 aa25.51■■□□□ 1.67
LHX3-202ENST00000371748 AEBP1Q8IUX7 1158 aa25.51■■□□□ 1.67
LHX3-202ENST00000371748 SSH1Q8WYL5 1049 aa25.49■■□□□ 1.67
LHX3-202ENST00000371748 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
LHX3-202ENST00000371748 MS4A1P11836 297 aa25.49■■□□□ 1.67
LHX3-202ENST00000371748 SULT6B1Q6IMI4 303 aa25.48■■□□□ 1.67
LHX3-202ENST00000371748 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
LHX3-202ENST00000371748 MAP3K19Q56UN5 1328 aa25.47■■□□□ 1.67
LHX3-202ENST00000371748 IGHDP01880 384 aa25.47■■□□□ 1.67
LHX3-202ENST00000371748 PDE4AP27815 886 aa25.46■■□□□ 1.67
LHX3-202ENST00000371748 RGPD1P0DJD0 1748 aa25.44■■□□□ 1.66
LHX3-202ENST00000371748 FAM83GA6ND36 823 aa25.44■■□□□ 1.66
LHX3-202ENST00000371748 NLRP6P59044 892 aa25.44■■□□□ 1.66
LHX3-202ENST00000371748 NUTM2GQ5VZR2 741 aa25.44■■□□□ 1.66
LHX3-202ENST00000371748 ZBTB47Q9UFB7 747 aaPredicted RBP25.44■■□□□ 1.66
LHX3-202ENST00000371748 NPHP4O75161 1426 aaPredicted RBP25.44■■□□□ 1.66
LHX3-202ENST00000371748 CALD1Q05682 793 aaKnown RBP25.44■■□□□ 1.66
LHX3-202ENST00000371748 FTSJ3Q8IY81 847 aaKnown RBP25.42■■□□□ 1.66
LHX3-202ENST00000371748 DZIP1LQ8IYY4 767 aaKnown RBP25.42■■□□□ 1.66
LHX3-202ENST00000371748 LMOD3Q0VAK6 560 aa25.42■■□□□ 1.66
LHX3-202ENST00000371748 BACH2Q9BYV9 841 aa25.42■■□□□ 1.66
LHX3-202ENST00000371748 MARF1Q9Y4F3 1742 aaKnown RBP25.42■■□□□ 1.66
LHX3-202ENST00000371748 GNAI1P63096 354 aa25.41■■□□□ 1.66
LHX3-202ENST00000371748 DCTN1Q14203 1278 aa25.41■■□□□ 1.66
LHX3-202ENST00000371748 IFT57Q9NWB7 429 aa25.41■■□□□ 1.66
LHX3-202ENST00000371748 SBNO1A3KN83 1393 aa25.41■■□□□ 1.66
LHX3-202ENST00000371748 TRIM27P14373 513 aa25.41■■□□□ 1.66
LHX3-202ENST00000371748 NOB1Q9ULX3 412 aaKnown RBP25.41■■□□□ 1.66
LHX3-202ENST00000371748 MVPQ14764 893 aaKnown RBP25.4■■□□□ 1.66
LHX3-202ENST00000371748 FLT4P35916 1363 aa25.4■■□□□ 1.66
LHX3-202ENST00000371748 MBIPQ9NS73 344 aa25.4■■□□□ 1.66
LHX3-202ENST00000371748 PHF8Q9UPP1 1060 aa25.4■■□□□ 1.66
LHX3-202ENST00000371748 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
LHX3-202ENST00000371748 AMPHP49418 695 aa25.39■■□□□ 1.66
LHX3-202ENST00000371748 ABTB2Q8N961 1025 aa25.39■■□□□ 1.65
LHX3-202ENST00000371748 PCDHB15Q9Y5E8 787 aa25.39■■□□□ 1.65
LHX3-202ENST00000371748 RGS3P49796 1198 aa25.38■■□□□ 1.65
LHX3-202ENST00000371748 ATF7IPQ6VMQ6 1270 aa25.38■■□□□ 1.65
LHX3-202ENST00000371748 ADGRL3Q9HAR2 1447 aa25.38■■□□□ 1.65
LHX3-202ENST00000371748 AAMPQ13685 434 aa25.37■■□□□ 1.65
LHX3-202ENST00000371748 ALDH1L2Q3SY69 923 aa25.37■■□□□ 1.65
LHX3-202ENST00000371748 TSPYL6Q8N831 410 aa25.37■■□□□ 1.65
LHX3-202ENST00000371748 C14orf37Q86TY3 774 aa25.36■■□□□ 1.65
LHX3-202ENST00000371748 CFAP44Q96MT7 982 aa25.36■■□□□ 1.65
LHX3-202ENST00000371748 ARHGEF10O15013 1369 aa25.35■■□□□ 1.65
LHX3-202ENST00000371748 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
LHX3-202ENST00000371748 KIF16BQ96L93 1317 aa25.35■■□□□ 1.65
LHX3-202ENST00000371748 VAMP4O75379 141 aa25.34■■□□□ 1.65
LHX3-202ENST00000371748 USP54Q70EL1 1684 aa25.34■■□□□ 1.65
LHX3-202ENST00000371748 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
LHX3-202ENST00000371748 ITPRIPQ8IWB1 547 aa25.32■■□□□ 1.64
LHX3-202ENST00000371748 ZNF428Q96B54 188 aa25.32■■□□□ 1.64
LHX3-202ENST00000371748 EYA1Q99502 592 aa25.32■■□□□ 1.64
LHX3-202ENST00000371748 MCM10Q7L590 875 aa25.31■■□□□ 1.64
LHX3-202ENST00000371748 NPM2Q86SE8 214 aaKnown RBP25.31■■□□□ 1.64
LHX3-202ENST00000371748 IPO8O15397 1037 aaKnown RBP25.31■■□□□ 1.64
LHX3-202ENST00000371748 TMEM57Q8N5G2 664 aa25.31■■□□□ 1.64
LHX3-202ENST00000371748 C8orf58Q8NAV2 365 aa25.3■■□□□ 1.64
LHX3-202ENST00000371748 HOXC9P31274 260 aa25.3■■□□□ 1.64
LHX3-202ENST00000371748 TWISTNBQ3B726 338 aaPredicted RBP25.3■■□□□ 1.64
LHX3-202ENST00000371748 DDX19BQ9UMR2 479 aa25.29■■□□□ 1.64
LHX3-202ENST00000371748 IGSF1Q8N6C5 1336 aa25.29■■□□□ 1.64
LHX3-202ENST00000371748 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
LHX3-202ENST00000371748 MRPL50Q8N5N7 158 aaKnown RBP25.28■■□□□ 1.64
LHX3-202ENST00000371748 KDRP35968 1356 aa25.28■■□□□ 1.64
LHX3-202ENST00000371748 FOXO3O43524 673 aa25.27■■□□□ 1.64
LHX3-202ENST00000371748 BRPF1P55201 1214 aaPredicted RBP25.27■■□□□ 1.64
LHX3-202ENST00000371748 PSME1Q06323 249 aa25.27■■□□□ 1.64
LHX3-202ENST00000371748 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
LHX3-202ENST00000371748 MTHFSDQ2M296 383 aaKnown RBP25.27■■□□□ 1.64
LHX3-202ENST00000371748 LTN1O94822 1766 aa25.26■■□□□ 1.63
LHX3-202ENST00000371748 ORAI2Q96SN7 254 aa25.25■■□□□ 1.63
LHX3-202ENST00000371748 RWDD1Q9H446 243 aaPredicted RBP25.25■■□□□ 1.63
LHX3-202ENST00000371748 KIF24Q5T7B8 1368 aa25.25■■□□□ 1.63
LHX3-202ENST00000371748 LTV1Q96GA3 475 aaPredicted RBP25.25■■□□□ 1.63
LHX3-202ENST00000371748 FAM161AQ3B820 660 aa25.24■■□□□ 1.63
LHX3-202ENST00000371748 C8orf34Q49A92 452 aa25.23■■□□□ 1.63
LHX3-202ENST00000371748 PROSER2Q86WR7 435 aaPredicted RBP25.23■■□□□ 1.63
LHX3-202ENST00000371748 CHL1O00533 1208 aa25.22■■□□□ 1.63
LHX3-202ENST00000371748 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
LHX3-202ENST00000371748 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
LHX3-202ENST00000371748 CRB1P82279 1406 aa25.2■■□□□ 1.63
LHX3-202ENST00000371748 ZBTB40Q9NUA8 1239 aa25.19■■□□□ 1.62
LHX3-202ENST00000371748 PDZRN3Q9UPQ7 1066 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms