RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ADAMTSL3P82987 1691 aa9.15□□□□□ -0.94
USP1-202ENST00000371146 LRRC7Q96NW7 1537 aa9.15□□□□□ -0.94
USP1-202ENST00000371146 MYL6BP14649 208 aa9.15□□□□□ -0.94
USP1-202ENST00000371146 POLKQ9UBT6 870 aa9.15□□□□□ -0.94
USP1-202ENST00000371146 ZFYVE9O95405 1425 aa9.15□□□□□ -0.94
USP1-202ENST00000371146 ADGRB3O60242 1522 aa9.15□□□□□ -0.95
USP1-202ENST00000371146 EYA1Q99502 592 aa9.15□□□□□ -0.95
USP1-202ENST00000371146 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
USP1-202ENST00000371146 ANXA1P04083 346 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 HOXC9P31274 260 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 R3HDM1Q15032 1099 aaKnown RBP9.14□□□□□ -0.95
USP1-202ENST00000371146 PLEKHO1Q53GL0 409 aaPredicted RBP9.14□□□□□ -0.95
USP1-202ENST00000371146 TMOD3Q9NYL9 352 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 TET3O43151 1660 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 PPP2R1AP30153 589 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 ZBTB7AO95365 584 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 BAG6P46379 1132 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 ADAMTS8Q9UP79 889 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 ALKQ9UM73 1620 aa9.14□□□□□ -0.95
USP1-202ENST00000371146 SLC4A10Q6U841 1118 aa9.13□□□□□ -0.95
USP1-202ENST00000371146 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
USP1-202ENST00000371146 EIF4A2Q14240 407 aaKnown RBP9.13□□□□□ -0.95
USP1-202ENST00000371146 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
USP1-202ENST00000371146 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
USP1-202ENST00000371146 TRPM2O94759 1503 aa9.13□□□□□ -0.95
USP1-202ENST00000371146 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
USP1-202ENST00000371146 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
USP1-202ENST00000371146 PTF1AQ7RTS3 328 aa9.12□□□□□ -0.95
USP1-202ENST00000371146 SPATA31D1Q6ZQQ2 1576 aa9.12□□□□□ -0.95
USP1-202ENST00000371146 AMER1Q5JTC6 1135 aaPredicted RBP9.11□□□□□ -0.95
USP1-202ENST00000371146 ARHGEF10O15013 1369 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 MYO3AQ8NEV4 1616 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 PRKRIP1Q9H875 184 aaPredicted RBP9.11□□□□□ -0.95
USP1-202ENST00000371146 ARHGEF25Q86VW2 580 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 TSPYL4Q9UJ04 414 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 MROH1Q8NDA8 1641 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 PIK3R4Q99570 1358 aa9.11□□□□□ -0.95
USP1-202ENST00000371146 KIF1BO60333 1816 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 AAMPQ13685 434 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 APBB1O00213 710 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
USP1-202ENST00000371146 IP6K1Q92551 441 aa9.1□□□□□ -0.95
USP1-202ENST00000371146 GOLGB1Q14789 3259 aaKnown RBP9.1□□□□□ -0.95
USP1-202ENST00000371146 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
USP1-202ENST00000371146 LGR6Q9HBX8 967 aa9.09□□□□□ -0.95
USP1-202ENST00000371146 EZH2Q15910 746 aaKnown RBP9.09□□□□□ -0.95
USP1-202ENST00000371146 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
USP1-202ENST00000371146 TSR2Q969E8 191 aaKnown RBP9.09□□□□□ -0.95
USP1-202ENST00000371146 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
USP1-202ENST00000371146 PHACTR3Q96KR7 559 aa9.09□□□□□ -0.95
USP1-202ENST00000371146 AK7Q96M32 723 aa9.09□□□□□ -0.95
USP1-202ENST00000371146 CCNL1Q9UK58 526 aaPredicted RBP9.09□□□□□ -0.95
USP1-202ENST00000371146 CROCC2H7BZ55 1655 aa9.09□□□□□ -0.95
USP1-202ENST00000371146 SPATA31A6Q5VVP1 1343 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 TTC21AQ8NDW8 1320 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 DCAF8L1A6NGE4 600 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 NBPF14Q5TI25 921 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 MYO5BQ9ULV0 1848 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 BTBD11A6QL63 1104 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 GPTP24298 496 aa9.08□□□□□ -0.96
USP1-202ENST00000371146 ZNF526Q8TF50 670 aaPredicted RBP9.08□□□□□ -0.96
USP1-202ENST00000371146 MST1RQ04912 1400 aa9.07□□□□□ -0.96
USP1-202ENST00000371146 IFNL2Q8IZJ0 200 aa9.07□□□□□ -0.96
USP1-202ENST00000371146 ASAP1Q9ULH1 1129 aa9.07□□□□□ -0.96
USP1-202ENST00000371146 GNPATO15228 680 aa9.07□□□□□ -0.96
USP1-202ENST00000371146 SPHKAPQ2M3C7 1700 aa9.07□□□□□ -0.96
USP1-202ENST00000371146 DEKP35659 375 aaKnown RBP9.06□□□□□ -0.96
USP1-202ENST00000371146 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
USP1-202ENST00000371146 PNPLA6Q8IY17 1366 aa9.06□□□□□ -0.96
USP1-202ENST00000371146 RALBP1Q15311 655 aa9.06□□□□□ -0.96
USP1-202ENST00000371146 MTHFSDQ2M296 383 aaKnown RBP9.06□□□□□ -0.96
USP1-202ENST00000371146 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
USP1-202ENST00000371146 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 LMTK2Q8IWU2 1503 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 UNC13BO14795 1591 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 EIF2AK4Q9P2K8 1649 aaKnown RBP9.05□□□□□ -0.96
USP1-202ENST00000371146 FAM196AQ6ZSG2 479 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 ANKRD36BQ8N2N9 1353 aa9.05□□□□□ -0.96
USP1-202ENST00000371146 TMEM131LA2VDJ0 1609 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 RGS17Q9UGC6 210 aaPredicted RBP9.04□□□□□ -0.96
USP1-202ENST00000371146 ERBB3P21860 1342 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 MARCH10Q8NA82 808 aaPredicted RBP9.04□□□□□ -0.96
USP1-202ENST00000371146 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 MYBBP1AQ9BQG0 1328 aaKnown RBP9.04□□□□□ -0.96
USP1-202ENST00000371146 RFC4P35249 363 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
USP1-202ENST00000371146 USP6P35125 1406 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
USP1-202ENST00000371146 IQGAP1P46940 1657 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms