RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.32
EBF3-202ENST00000368648 KDM4AO75164 1064 aa13.02□□□□□ -0.33
EBF3-202ENST00000368648 ATP6V1DQ9Y5K8 247 aa13.02□□□□□ -0.33
EBF3-202ENST00000368648 FOXO3O43524 673 aa13.02□□□□□ -0.33
EBF3-202ENST00000368648 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
EBF3-202ENST00000368648 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
EBF3-202ENST00000368648 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
EBF3-202ENST00000368648 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 MBD3O95983 291 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 RABEP1Q15276 862 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
EBF3-202ENST00000368648 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
EBF3-202ENST00000368648 PRKAR2BP31323 418 aa13.01□□□□□ -0.33
EBF3-202ENST00000368648 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
EBF3-202ENST00000368648 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
EBF3-202ENST00000368648 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
EBF3-202ENST00000368648 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
EBF3-202ENST00000368648 SASS6Q6UVJ0 657 aa13□□□□□ -0.33
EBF3-202ENST00000368648 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
EBF3-202ENST00000368648 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
EBF3-202ENST00000368648 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
EBF3-202ENST00000368648 PDE4CQ08493 712 aa13□□□□□ -0.33
EBF3-202ENST00000368648 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
EBF3-202ENST00000368648 FERMT3Q86UX7 667 aa13□□□□□ -0.33
EBF3-202ENST00000368648 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
EBF3-202ENST00000368648 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
EBF3-202ENST00000368648 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
EBF3-202ENST00000368648 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
EBF3-202ENST00000368648 DTNBO60941 627 aa12.99□□□□□ -0.33
EBF3-202ENST00000368648 CAMK4Q16566 473 aa12.99□□□□□ -0.33
EBF3-202ENST00000368648 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
EBF3-202ENST00000368648 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
EBF3-202ENST00000368648 AIMP1Q12904 312 aaKnown RBP12.99□□□□□ -0.33
EBF3-202ENST00000368648 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
EBF3-202ENST00000368648 RLBP1P12271 317 aa12.98□□□□□ -0.33
EBF3-202ENST00000368648 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
EBF3-202ENST00000368648 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
EBF3-202ENST00000368648 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 GOLGA6L1Q8N7Z2 621 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
EBF3-202ENST00000368648 C16orf45Q96MC5 204 aaPredicted RBP12.97□□□□□ -0.33
EBF3-202ENST00000368648 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
EBF3-202ENST00000368648 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
EBF3-202ENST00000368648 G3V3G9 751 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
EBF3-202ENST00000368648 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
EBF3-202ENST00000368648 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
EBF3-202ENST00000368648 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
EBF3-202ENST00000368648 STK3Q13188 491 aa12.96□□□□□ -0.33
EBF3-202ENST00000368648 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
EBF3-202ENST00000368648 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
EBF3-202ENST00000368648 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
EBF3-202ENST00000368648 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.34
EBF3-202ENST00000368648 TPM4P67936 248 aa12.96□□□□□ -0.34
EBF3-202ENST00000368648 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.34
EBF3-202ENST00000368648 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 C17orf53Q8N3J3 647 aaPredicted RBP12.95□□□□□ -0.34
EBF3-202ENST00000368648 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 ZSCAN23Q3MJ62 389 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 TRIM27P14373 513 aa12.95□□□□□ -0.34
EBF3-202ENST00000368648 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
EBF3-202ENST00000368648 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
EBF3-202ENST00000368648 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
EBF3-202ENST00000368648 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
EBF3-202ENST00000368648 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
EBF3-202ENST00000368648 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
EBF3-202ENST00000368648 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
EBF3-202ENST00000368648 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
EBF3-202ENST00000368648 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 ABCA8O94911 1581 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 NOS1P29475 1434 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 GNAI1P63096 354 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
EBF3-202ENST00000368648 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 CCDC66A2RUB6 948 aa12.93□□□□□ -0.34
EBF3-202ENST00000368648 NOC3LQ8WTT2 800 aaKnown RBP12.92□□□□□ -0.34
EBF3-202ENST00000368648 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
EBF3-202ENST00000368648 CKAP2LQ8IYA6 745 aa12.92□□□□□ -0.34
EBF3-202ENST00000368648 TOMM22Q9NS69 142 aa12.92□□□□□ -0.34
EBF3-202ENST00000368648 SURF6O75683 361 aaKnown RBP12.92□□□□□ -0.34
EBF3-202ENST00000368648 NME9Q86XW9 330 aa12.92□□□□□ -0.34
EBF3-202ENST00000368648 YEATS2Q9ULM3 1422 aa12.92□□□□□ -0.34
EBF3-202ENST00000368648 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms